WormBase Tree Display for Gene: WBGene00009898
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| WBGene00009898 | Evidence | Paper_evidence | WBPaper00005976 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F49E12 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | dod-23 | Person_evidence | WBPerson1157 | |||||
| Sequence_name | F49E12.2 | ||||||||
| Molecular_name | F49E12.2 | ||||||||
| F49E12.2.1 | |||||||||
| CE03379 | |||||||||
| Other_name | CELE_F49E12.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | dod-23 | ||||||||
| DB_info | Database | AceView | gene | 2I686 | |||||
| WormQTL | gene | WBGene00009898 | |||||||
| WormFlux | gene | WBGene00009898 | |||||||
| NDB | locus_tag | CELE_F49E12.2 | |||||||
| NCBI | gene | 186056 | |||||||
| RefSeq | protein | NM_063366.4 | |||||||
| TREEFAM | TREEFAM_ID | TF318891 | |||||||
| TrEMBL | UniProtAcc | Q20615 | |||||||
| UniProt_GCRP | UniProtAcc | Q20615 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 25 Aug 2004 11:14:31 | WBPerson1971 | Name_change | CGC_name | dod-23 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dod | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00235267 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in germ line; intestine; pharyngeal muscle cell; and pharyngeal-intestinal valve based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; RNA-seq; tiling array; and proteomic studies. Is affected by twenty-eight chemicals including aldicarb; Ethanol; and 1-methylnicotinamide based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F49E12.2 | |||||||
| Corresponding_transcript | F49E12.2.1 | ||||||||
| Other_sequence | CR00916 | ||||||||
| CRC11340_1 | |||||||||
| CBC01567_1 | |||||||||
| CBC03779_1 | |||||||||
| CRC09559_1 | |||||||||
| Associated_feature | WBsf223490 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00063218 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00082513 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090749 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047851 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015318 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032538 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11726 | ||||||||
| Expr1029138 | |||||||||
| Expr1151685 | |||||||||
| Expr2011019 | |||||||||
| Expr2029256 | |||||||||
| Drives_construct | WBCnstr00031832 | ||||||||
| Construct_product | WBCnstr00031832 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (345) | |||||||||
| Interaction (187) | |||||||||
| Map_info | Map | II | Position | 0.769368 | Error | 0.000408 | |||
| Positive | Positive_clone | F49E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005976 | ||||||||
| WBPaper00057006 | |||||||||
| WBPaper00058665 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
