WormBase Tree Display for Gene: WBGene00009898
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WBGene00009898 | Evidence | Paper_evidence | WBPaper00005976 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F49E12 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dod | ||||||
Allele (23) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (34) | |||||||
Paralog | WBGene00235267 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in germ line; intestine; pharyngeal muscle cell; and pharyngeal-intestinal valve based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; RNA-seq; tiling array; and proteomic studies. Is affected by twenty-eight chemicals including aldicarb; Ethanol; and 1-methylnicotinamide based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F49E12.2 | |||||
Corresponding_transcript | F49E12.2.1 | ||||||
Other_sequence | CR00916 | ||||||
CRC11340_1 | |||||||
CBC01567_1 | |||||||
CBC03779_1 | |||||||
CRC09559_1 | |||||||
Associated_feature | WBsf223490 | ||||||
Experimental_info | RNAi_result | WBRNAi00063218 | Inferred_automatically | RNAi_primary | |||
WBRNAi00082513 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00090749 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047851 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015318 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032538 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr11726 | ||||||
Expr1029138 | |||||||
Expr1151685 | |||||||
Expr2011019 | |||||||
Expr2029256 | |||||||
Drives_construct | WBCnstr00031832 | ||||||
Construct_product | WBCnstr00031832 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (345) | |||||||
Interaction (187) | |||||||
Map_info | Map | II | Position | 0.769368 | Error | 0.000408 | |
Positive | Positive_clone | F49E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00005976 | ||||||
WBPaper00057006 | |||||||
WBPaper00058665 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |