WormBase Tree Display for Gene: WBGene00000841

WBGene00000841 SMap: S_parent: Sequence: K08E7
  Identity: Version: 1
    Name: CGC_name: cul-6 Person_evidence: WBPerson1052
      Sequence_name: K08E7.7
      Molecular_name: K08E7.7a
        K08E7.7a.1
        CE11928
        K08E7.7b
      Other_name: CELE_K08E7.7 Accession_evidence: NDB BX284604
      Public_name: cul-6
    DB_info: Database: AceView gene 4N352
        WormQTL gene WBGene00000841
        WormFlux gene WBGene00000841
        NDB locus_tag CELE_K08E7.7
        Panther gene CAEEL|WormBase=WBGene00000841|UniProtKB=Q21346
          family PTHR11932
        NCBI gene 178214
        RefSeq protein NR_131627.1
            NM_070011.5
        SwissProt UniProtAcc Q21346
        UniProt_GCRP UniProtAcc Q21346
        RNAcentral URSid URS0000769E8B
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cul
    Allele (55)
    Strain: WBStrain00032115
    RNASeq_FPKM (74)
    GO_annotation: 00071353
      00071354
      00071355
      00071356
      00071357
      00071358
      00107889
      00107890
    Ortholog (77)
    Paralog: WBGene00000836 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00000837 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000838 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000839 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000840 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000143 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: cul-6 encodes a member of the cullin family that may physically interact with SKR-3. Paper_evidence: WBPaper00005129
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable protein-macromolecule adaptor activity and ubiquitin protein ligase binding activity. Involved in defense response to virus. Predicted to be part of SCF ubiquitin ligase complex. Expressed in intestine and pharynx. Is an ortholog of human CUL1 (cullin 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K08E7.7a
    Corresponding_transcript: K08E7.7b
      K08E7.7a.1
    Associated_feature: WBsf668437
      WBsf231041
  Experimental_info: RNAi_result (14)
    Expr_pattern: Expr13462
      Expr14985
      Expr1010365
      Expr1154010
      Expr2010591
      Expr2028831
    Drives_construct: WBCnstr00037252
    Construct_product: WBCnstr00037252
      WBCnstr00041501
      WBCnstr00041502
      WBCnstr00041503
    Microarray_results (18)
    Expression_cluster (233)
    Interaction (63)
  Map_info: Map: IV Position: 6.07013 Error: 0.011231
    Positive: Positive_clone: K08E7 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5595
        4162
    Pseudo_map_position
  Reference (21)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene