WormBase Tree Display for Gene: WBGene00000841
expand all nodes | collapse all nodes | view schema
| WBGene00000841 | SMap | S_parent | Sequence | K08E7 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | cul | ||||||
| Allele (55) | |||||||
| Strain | WBStrain00032115 | ||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation | 00071353 | ||||||
| 00071354 | |||||||
| 00071355 | |||||||
| 00071356 | |||||||
| 00071357 | |||||||
| 00071358 | |||||||
| 00107889 | |||||||
| 00107890 | |||||||
| Ortholog (77) | |||||||
| Paralog | WBGene00000836 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Inparanoid_8 | |||||||
| Panther | |||||||
| WormBase-Compara | |||||||
| WBGene00000837 | Caenorhabditis elegans | From_analysis | Panther | ||||
| WormBase-Compara | |||||||
| WBGene00000838 | Caenorhabditis elegans | From_analysis | Panther | ||||
| WormBase-Compara | |||||||
| WBGene00000839 | Caenorhabditis elegans | From_analysis | Panther | ||||
| WormBase-Compara | |||||||
| WBGene00000840 | Caenorhabditis elegans | From_analysis | Panther | ||||
| WormBase-Compara | |||||||
| WBGene00000143 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
| Structured_description | Concise_description | cul-6 encodes a member of the cullin family that may physically interact with SKR-3. | Paper_evidence | WBPaper00005129 | |||
| Curator_confirmed | WBPerson48 | ||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
| Automated_description | Predicted to enable protein-macromolecule adaptor activity and ubiquitin protein ligase binding activity. Involved in defense response to virus. Predicted to be part of SCF ubiquitin ligase complex. Expressed in intestine and pharynx. Is an ortholog of human CUL1 (cullin 1). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | K08E7.7a | |||||
| Corresponding_transcript | K08E7.7b | ||||||
| K08E7.7a.1 | |||||||
| Associated_feature | WBsf668437 | ||||||
| WBsf231041 | |||||||
| Experimental_info | RNAi_result (14) | ||||||
| Expr_pattern | Expr13462 | ||||||
| Expr14985 | |||||||
| Expr1010365 | |||||||
| Expr1154010 | |||||||
| Expr2010591 | |||||||
| Expr2028831 | |||||||
| Drives_construct | WBCnstr00037252 | ||||||
| Construct_product | WBCnstr00037252 | ||||||
| WBCnstr00041501 | |||||||
| WBCnstr00041502 | |||||||
| WBCnstr00041503 | |||||||
| Microarray_results (18) | |||||||
| Expression_cluster (233) | |||||||
| Interaction (63) | |||||||
| Map_info | Map | IV | Position | 6.07013 | Error | 0.011231 | |
| Positive | Positive_clone | K08E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Mapping_data | Multi_point | 5595 | |||||
| 4162 | |||||||
| Pseudo_map_position | |||||||
| Reference (21) | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
