WormBase Tree Display for Gene: WBGene00008269
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| WBGene00008269 | SMap | S_parent | Sequence | C53A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C53A5.11 | |||||||
| Molecular_name | C53A5.11 | ||||||||
| C53A5.11.1 | |||||||||
| CE52300 | |||||||||
| Other_name | CELE_C53A5.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C53A5.11 | ||||||||
| DB_info | Database | AceView | gene | 5P41 | |||||
| WormQTL | gene | WBGene00008269 | |||||||
| WormFlux | gene | WBGene00008269 | |||||||
| NDB | locus_tag | CELE_C53A5.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008269|UniProtKB=O17702 | |||||||
| family | PTHR24412 | ||||||||
| NCBI | gene | 183741 | |||||||
| RefSeq | protein | NM_074206.2 | |||||||
| TREEFAM | TREEFAM_ID | TF351241 | |||||||
| TrEMBL | UniProtAcc | O17702 | |||||||
| UniProt_GCRP | UniProtAcc | O17702 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (87) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Automated_description | Enriched in cholinergic neurons and pharyngeal cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including skn-1; lin-4; and lin-14 based on microarray and RNA-seq studies. Is affected by ten chemicals including Tunicamycin; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Kelch motif; Galactose oxidase/kelch, beta-propeller; Kelch repeat type 1; and Kelch-type beta propeller. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53A5.11 | |||||||
| Corresponding_CDS_history | C53A5.11:wp261 | ||||||||
| Corresponding_transcript | C53A5.11.1 | ||||||||
| Associated_feature | WBsf662091 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012331 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043058 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022492 | ||||||||
| Expr1147021 | |||||||||
| Expr2001874 | |||||||||
| Expr2020100 | |||||||||
| Drives_construct | WBCnstr00033098 | ||||||||
| Construct_product | WBCnstr00033098 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (116) | |||||||||
| Interaction (124) | |||||||||
| Map_info | Positive | Positive_clone | C53A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.49086 | |||||||
| Reference | WBPaper00055090 | ||||||||
| WBPaper00062345 | |||||||||
| Method | Gene |
