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WormBase Tree Display for Gene: WBGene00001887

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Name Class

WBGene00001887SMapS_parentSequenceZK131
IdentityVersion1
NameCGC_namehis-13Person_evidenceWBPerson160
Sequence_nameZK131.7
Molecular_nameZK131.7
ZK131.7.1
CE03253
Other_nameCELE_ZK131.7Accession_evidenceNDBBX284602
Public_namehis-13
DB_infoDatabaseAceViewgene2O111
WormFluxgeneWBGene00001887
NDBlocus_tagCELE_ZK131.7
NCBIgene191672
RefSeqproteinNM_064489.1
SwissProtUniProtAccP08898
UniProt_GCRPUniProtAccP08898
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhis
AlleleWBVar01498435
WBVar01498941
WBVar01499702
Legacy_information[C.elegansII] NMK. Histone type H3. HIS3 cluster. [Roberts et al. 1989; EM]
In_clusterHIS3_cluster
RNASeq_FPKM (74)
GO_annotation00109269
00109270
00109271
00109272
Ortholog (128)
Paralog (22)
Structured_descriptionConcise_descriptionhis-13 encodes an H3 histone; his-13 is contained within the histone gene cluster HIS3.Paper_evidenceWBPaper00001150
Curator_confirmedWBPerson48
WBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of several human genes including H3C1 (H3 clustered histone 1); H3C3 (H3 clustered histone 3); and H3C4 (H3 clustered histone 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSZK131.7
Corresponding_transcriptZK131.7.1
Other_sequenceDviv_isotig00246
FG354250.1
Dviv_isotig00243
SSC01579_1
SS03303
Associated_featureWBsf222395
Experimental_infoRNAi_result (12)
Expr_patternExpr7195
Expr1162655
Drives_constructWBCnstr00003907
WBCnstr00036624
Construct_productWBCnstr00036624
AntibodyWBAntibody00000455
WBAntibody00000456
WBAntibody00000457
WBAntibody00000458
Microarray_results (30)
Expression_cluster (95)
Interaction (179)
Map_infoMapIIPosition20.3
PositivePositive_cloneZK131Inferred_automaticallyFrom sequence, transcript, pseudogene data
ZK831
Pseudo_map_position
ReferenceWBPaper00001150
WBPaper00005142
WBPaper00005182
WBPaper00030768
WBPaper00038491
WBPaper00040135
WBPaper00040574
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene