WormBase Tree Display for Gene: WBGene00020457

WBGene00020457 SMap: S_parent: Sequence: T12B5
  Identity: Version: 2
    Name: CGC_name: fbxa-67 Person_evidence: WBPerson655
      Sequence_name: T12B5.11
      Molecular_name: T12B5.11
        T12B5.11.1
        CE20068
      Other_name: CELE_T12B5.11 Accession_evidence: NDB BX284603
      Public_name: fbxa-67
    DB_info: Database: AceView gene 3B568
        WormQTL gene WBGene00020457
        WormFlux gene WBGene00020457
        NDB locus_tag CELE_T12B5.11
        Panther gene CAEEL|WormBase=WBGene00020457|UniProtKB=Q9TZ24
          family PTHR23015
        NCBI gene 175258
        RefSeq protein NM_064901.6
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc Q9TZ24
        UniProt_GCRP UniProtAcc Q9TZ24
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-67
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (153)
    RNASeq_FPKM (74)
    Ortholog (18)
    Paralog (225)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABplapaaapa; ABplppppaa; ABprapaaapa; ABprppppaa; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twelve chemicals including bisphenol A; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T12B5.11
    Corresponding_transcript: T12B5.11.1
    Associated_feature: WBsf650831
      WBsf226166
      WBsf226167
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr1025504
      Expr1156774
      Expr2011568
      Expr2029806
    Drives_construct: WBCnstr00025123
    Construct_product: WBCnstr00025123
    Microarray_results (22)
    Expression_cluster (169)
    Interaction: WBInteraction000291995
      WBInteraction000306350
      WBInteraction000318032
      WBInteraction000324010
      WBInteraction000357468
      WBInteraction000380177
  Map_info: Map: III Position: -25.0047 Error: 0.011088
    Positive: Positive_clone: T12B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene