WormBase Tree Display for Gene: WBGene00019208
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| WBGene00019208 | SMap | S_parent | Sequence | H17B01 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | lips-14 | Person_evidence | WBPerson261 | ||||||
| Sequence_name | H17B01.3 | |||||||||
| Molecular_name | H17B01.3 | |||||||||
| Other_name | CELE_H17B01.3 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | lips-14 | |||||||||
| DB_info | Database | AceView | gene | 2B770 | ||||||
| WormQTL | gene | WBGene00019208 | ||||||||
| WormFlux | gene | WBGene00019208 | ||||||||
| NDB | locus_tag | CELE_H17B01.3 | ||||||||
| NCBI | gene | 186750 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 20 Dec 2007 11:31:35 | WBPerson2970 | Name_change | CGC_name | lips-14 | |||||
| 3 | 18 Feb 2016 15:26:56 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | lips | |||||||||
| Allele (40) | ||||||||||
| Strain | WBStrain00049421 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00191465 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00162263 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00066325 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00066324 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog (17) | ||||||||||
| Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by nineteen chemicals including hydrogen sulfide; D-glucose; and bisphenol A based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | H17B01.3:wp252 | ||||||||
| Corresponding_pseudogene | H17B01.3 | |||||||||
| Associated_feature | WBsf986712 | |||||||||
| WBsf986713 | ||||||||||
| WBsf986714 | ||||||||||
| WBsf1011573 | ||||||||||
| WBsf222693 | ||||||||||
| Experimental_info | Expr_pattern | Expr1026584 | ||||||||
| Expr1153153 | ||||||||||
| Microarray_results (11) | ||||||||||
| Expression_cluster (206) | ||||||||||
| Interaction | WBInteraction000109930 | |||||||||
| WBInteraction000239353 | ||||||||||
| WBInteraction000272880 | ||||||||||
| WBInteraction000306217 | ||||||||||
| WBInteraction000317132 | ||||||||||
| WBInteraction000377521 | ||||||||||
| WBInteraction000396947 | ||||||||||
| WBInteraction000416004 | ||||||||||
| WBInteraction000446569 | ||||||||||
| WBInteraction000456528 | ||||||||||
| Map_info | Map | II | Position | -15.4356 | Error | 0.001486 | ||||
| Positive | Positive_clone | H17B01 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00042257 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
