WormBase Tree Display for Gene: WBGene00016912

WBGene00016912 SMap: S_parent: Sequence: C54D1
  Identity: Version: 2
    Name: CGC_name: clec-86 Person_evidence: WBPerson261
            WBPerson655
      Sequence_name: C54D1.2
      Molecular_name: C54D1.2
        C54D1.2.1
        CE06978
      Other_name: CELE_C54D1.2 Accession_evidence: NDB BX284606
      Public_name: clec-86
    DB_info: Database: AceView gene XH759
        WormQTL gene WBGene00016912
        WormFlux gene WBGene00016912
        NDB locus_tag CELE_C54D1.2
        Panther gene CAEEL|WormBase=WBGene00016912|UniProtKB=Q18821
          family PTHR22802
        NCBI gene 183775
        RefSeq protein NM_076801.2
        TREEFAM TREEFAM_ID TF317914
        TrEMBL UniProtAcc Q18821
        UniProt_GCRP UniProtAcc Q18821
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 28 Sep 2005 17:40:12 WBPerson2970 Name_change: CGC_name: clec-86
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (12)
    RNASeq_FPKM (74)
    GO_annotation: 00062464
      00062465
      00062466
    Ortholog (24)
    Paralog (25)
    Structured_description: Automated_description: Predicted to enable carbohydrate binding activity. Involved in innate immune response. Predicted to be located in external side of plasma membrane. Human ortholog(s) of this gene implicated in Alzheimer's disease; autoimmune disease (multiple); and cholangiocarcinoma. Is an ortholog of human REG1A (regenerating family member 1 alpha); REG1B (regenerating family member 1 beta); and REG3G (regenerating family member 3 gamma). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:10652 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9951)
      DOID:9744 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9951)
      DOID:4947 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9951)
      DOID:12894 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9951)
  Molecular_info: Corresponding_CDS: C54D1.2
    Corresponding_transcript: C54D1.2.1
    Other_sequence: CBC03154_1
    Associated_feature: WBsf648279
      WBsf235901
  Experimental_info: RNAi_result: WBRNAi00078252 Inferred_automatically: RNAi_primary
      WBRNAi00030134 Inferred_automatically: RNAi_primary
      WBRNAi00012376 Inferred_automatically: RNAi_primary
      WBRNAi00043127 Inferred_automatically: RNAi_primary
      WBRNAi00089019 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010355
      Expr1037257
      Expr1147096
      Expr2010217
      Expr2028458
    Drives_construct: WBCnstr00027710
    Construct_product: WBCnstr00027710
    Microarray_results (19)
    Expression_cluster (249)
    Interaction: WBInteraction000031645
      WBInteraction000234585
  Map_info: Map: X Position: -1.82766
    Positive: Positive_clone: C54D1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027722
    WBPaper00031686
    WBPaper00033987
    WBPaper00037524
    WBPaper00038491
    WBPaper00055090
    WBPaper00065681
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene