WormBase Tree Display for Gene: WBGene00007660

WBGene00007660 SMap: S_parent: Sequence: C17H1
  Identity: Version: 2
    Name: CGC_name: pals-6 Person_evidence: WBPerson260
      Sequence_name: C17H1.7
      Molecular_name: C17H1.7
        WP:CE15629
        CE15629
        C17H1.7.1
      Other_name: CELE_C17H1.7 Accession_evidence: NDB BX284601
      Public_name: pals-6
    DB_info: Database: AceView gene 1N722
        WormQTL gene WBGene00007660
        WormFlux gene WBGene00007660
        NDB locus_tag CELE_C17H1.7
        NCBI gene 182749
        RefSeq mRNA NM_060900.1
          protein NP_493301.1
            NM_060900.2
        TREEFAM TREEFAM_ID TF322118
        UniProt UniProtAcc O45258
        TrEMBL UniProtAcc O45258
        UniProt_GCRP UniProtAcc O45258
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Oct 2016 09:42:35 WBPerson2970 Name_change: CGC_name: pals-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pals
    Allele (40)
    RNASeq_FPKM (74)
    Ortholog: WBGene00271585 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP26.g4056 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP40.g862 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_V.g18706 Caenorhabditis nigoni From_analysis: WormBase-Compara
      GCK72_018441 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrI_pilon.g2659 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00007657 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007659 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00012505 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007131 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007132 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007134 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in OLL; PVD; dopaminergic neurons; and intestine based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-three chemicals including Nitric Oxide; Tunicamycin; and D-glucose based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C17H1.7
    Corresponding_transcript: C17H1.7.1
    Other_sequence: GO252143.1
      EL888688.1
      DW718210.1
    Associated_feature: WBsf1011016
      WBsf220479
      WBsf220480
  Experimental_info: RNAi_result: WBRNAi00040850 Inferred_automatically: RNAi_primary
      WBRNAi00002984 Inferred_automatically: RNAi_primary
      WBRNAi00029028 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018712
      Expr1144897
      Expr2014712
      Expr2032947
    Drives_construct: WBCnstr00033572
    Construct_product: WBCnstr00033572
    Microarray_results (16)
    Expression_cluster (303)
    Interaction: WBInteraction000198043
      WBInteraction000338430
      WBInteraction000452769
      WBInteraction000524306
  Map_info: Map: I Position: 17.223
    Positive: Positive_clone: C17H1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00061877
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene