WormBase Tree Display for Gene: WBGene00007657

WBGene00007657 SMap: S_parent: Sequence: C17H1
  Identity: Version: 3
    Name: CGC_name: pals-3 Person_evidence: WBPerson260
      Sequence_name: C17H1.4
      Molecular_name: C17H1.4a
        WP:CE39561
        CE39561
        C17H1.4b
        C17H1.4a.1
      Other_name: CELE_C17H1.4 Accession_evidence: NDB BX284601
      Public_name: pals-3
    DB_info: Database: AceView gene C17H1.4
            1N700
        WormQTL gene WBGene00007657
        WormFlux gene WBGene00007657
        NDB locus_tag CELE_C17H1.4
        NCBI gene 173179
        RefSeq mRNA NM_060895.2
          protein NP_493296.2
            NR_132565.1
            NM_060895.4
        UniProt UniProtAcc O45255
        RNAcentral URSid URS0000843376
        TrEMBL UniProtAcc O45255
        UniProt_GCRP UniProtAcc O45255
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 13 Jan 2006 09:36:01 WBPerson1983 Event: Split_into: WBGene00044709
        3 26 Oct 2016 09:42:35 WBPerson2970 Name_change: CGC_name: pals-3
      Split_into: WBGene00044709
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pals
    Allele (194)
    RNASeq_FPKM (74)
    Ortholog: WBGene00271585 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP26.g4056 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP40.g862 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_V.g18706 Caenorhabditis nigoni From_analysis: WormBase-Compara
      GCK72_018441 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrI_pilon.g2651 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00007654 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00007659 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007660 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00012505 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007131 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007132 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007134 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in excretory cell and neurons based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; skn-1; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; Mercuric Chloride; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C17H1.4a
    Corresponding_CDS_history: C17H1.4:wp153
    Corresponding_transcript: C17H1.4b
      C17H1.4a.1
    Other_sequence: DI01433
      TX01836
      FC811821.1
  Experimental_info: RNAi_result: WBRNAi00029027 Inferred_automatically: RNAi_primary
      WBRNAi00070111 Inferred_automatically: RNAi_primary
      WBRNAi00002981 Inferred_automatically: RNAi_primary
      WBRNAi00040847 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010289
      Expr1144894
    Drives_construct: WBCnstr00033575
    Construct_product: WBCnstr00033575
    Microarray_results (23)
    Expression_cluster (146)
    Interaction (62)
  Map_info: Map: I Position: 17.2197
    Positive: Positive_clone: C17H1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00030811
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene