WormBase Tree Display for Gene: WBGene00010977
expand all nodes | collapse all nodes | view schema
WBGene00010977 | SMap | S_parent | Sequence | R02D5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R02D5.3 | |||||||
Molecular_name | R02D5.3 | ||||||||
R02D5.3.1 | |||||||||
CE40234 | |||||||||
Other_name | CELE_R02D5.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | R02D5.3 | ||||||||
DB_info | Database | AceView | gene | 5O963 | |||||
WormQTL | gene | WBGene00010977 | |||||||
WormFlux | gene | WBGene00010977 | |||||||
NDB | locus_tag | CELE_R02D5.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010977|UniProtKB=Q21635 | |||||||
family | PTHR33748 | ||||||||
NCBI | gene | 187521 | |||||||
RefSeq | protein | NM_074192.6 | |||||||
TREEFAM | TREEFAM_ID | TF320948 | |||||||
TrEMBL | UniProtAcc | Q21635 | |||||||
UniProt_GCRP | UniProtAcc | Q21635 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (22) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00072279 | ||||||||
00072280 | |||||||||
00118275 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00008496 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00017299 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00012439 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00045418 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00015622 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00013195 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Predicted to be located in membrane. Predicted to be part of acetylcholine-gated channel complex. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R02D5.3 | |||||||
Corresponding_CDS_history | R02D5.3:wp158 | ||||||||
Corresponding_transcript | R02D5.3.1 | ||||||||
Other_sequence | CJC01135_1 | ||||||||
Associated_feature | WBsf232933 | ||||||||
Experimental_info | RNAi_result | WBRNAi00017320 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051132 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034534 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078377 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011890 | ||||||||
Expr1154841 | |||||||||
Expr2005320 | |||||||||
Expr2023540 | |||||||||
Drives_construct | WBCnstr00031021 | ||||||||
Construct_product | WBCnstr00015411 | ||||||||
WBCnstr00031021 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (225) | |||||||||
SAGE_tag | SAGE:tttatattgt | Strand | Antisense | ||||||
SAGE:tgcattcgattatgccg | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tgcattcgat | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tgatcagtga | Strand | Antisense | |||||||
SAGE:agcaattggt | Strand | Antisense | |||||||
SAGE:tagatgattg | Strand | Antisense | |||||||
Interaction | WBInteraction000050727 | ||||||||
WBInteraction000275069 | |||||||||
WBInteraction000382684 | |||||||||
WBInteraction000408822 | |||||||||
WBInteraction000416053 | |||||||||
WBInteraction000417619 | |||||||||
WBInteraction000420624 | |||||||||
WBInteraction000433478 | |||||||||
WBInteraction000444989 | |||||||||
WBInteraction000456619 | |||||||||
Map_info | Positive | Positive_clone | R02D5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 6.42454 | |||||||
Method | Gene |