WormBase Tree Display for Expression_cluster: WBPaper00027722:Microbacterium_nematophilum_upregulated

WBPaper00027722:Microbacterium_nematophilum_upregulated Description: Genes up regulated by the virulent strain of Microbacterium nematophilum (CBX102).
  Species: Caenorhabditis elegans
  Algorithm: A probe that is induced or repressed at least twofold in a replicate to was defined as changed. The set of probes that, across replicates marked as Present by MAS5.0, were both (1) changed in at least two replicates and (2) changed on average. The second criterion is redundant when all three replicates are changed, but helps control situations where one replicate is markedly different from the others. These probes have a false discovery rate (FDR) of ~5%.
  Reference: WBPaper00027722
  Microarray_results: 193745_at
    175317_s_at
    182470_at
    186521_at
    172971_s_at
    173558_at
    173840_s_at
    174012_s_at
    177104_at
    177279_at
    178248_at
    178435_at
    179373_at
    180427_at
    180612_s_at
    184533_at
    186273_at
    186801_s_at
    187964_at
    188007_at
    188975_at
    190906_at
    191527_s_at
    193588_s_at
    173257_s_at
    186179_at
    180721_at
    193214_s_at
    180727_at
    194066_s_at
    186706_at
    173704_s_at
    173729_at
    174675_at
    176743_s_at
    178797_at
    179695_at
    179858_at
    181565_at
    183652_at
    184534_s_at
    185003_s_at
    185554_s_at
    185557_s_at
    186337_at
    189015_at
    189971_at
    190178_s_at
    190545_at
    190978_at
    192195_at
    192509_at
    192628_at
    192737_at
    194056_s_at
    175212_at
    172184_x_at
    173609_at
    174073_at
    174347_s_at
    176044_at
    176349_s_at
    177219_at
    177681_s_at
    177903_s_at
    179457_at
    182733_at
    184993_at
    187282_at
    190139_s_at
    173086_s_at
  Gene: WBGene00002981
    WBGene00304811
    WBGene00017303
    WBGene00017659
    WBGene00021876
    WBGene00013898
    WBGene00011584
    WBGene00009957
    WBGene00021581
    WBGene00019780
    WBGene00007414
    WBGene00007660
    WBGene00008234
    WBGene00022597
    WBGene00018731
    WBGene00015933
    WBGene00019533
    WBGene00019931
    WBGene00018459
    WBGene00018460
    WBGene00018461
    WBGene00010062
    WBGene00014770
    WBGene00006984
    WBGene00007599
    WBGene00012383
    WBGene00007404
    WBGene00009213
    WBGene00009215
    WBGene00044728
    WBGene00019411
    WBGene00016669
    WBGene00002052
    WBGene00018645
    WBGene00014047
    WBGene00219216
    WBGene00021072
    WBGene00020700
    WBGene00009221
    WBGene00018970
    WBGene00018971
    WBGene00044642
    WBGene00008211
    WBGene00009429
    WBGene00016769
    WBGene00001391
    WBGene00018707
    WBGene00012664
    WBGene00003096
    WBGene00018380
    WBGene00016912
    WBGene00001158
    WBGene00045179
    WBGene00017464
    WBGene00003402
    WBGene00010790
    WBGene00014046
    WBGene00001591
    WBGene00009895
    WBGene00009393
    WBGene00021873
    WBGene00021580
    WBGene00006650
    WBGene00021518
    WBGene00020774
    WBGene00010899
    WBGene00014136
    WBGene00008602
    WBGene00007097
    WBGene00007833
    WBGene00019145
    WBGene00019146
    WBGene00017698
    WBGene00008477
    WBGene00017834
  Attribute_of: Microarray_experiment: WBPaper00027722:1C1inf6hr
      WBPaper00027722:2C1inf6hr
      WBPaper00027722:3C1inf6hr
      WBPaper00027722:1C3uninf6hr
      WBPaper00027722:2C3uninf6hr
      WBPaper00027722:3C3uninf6hr
  Regulation: Regulated_by_treatment: Bacteria infection: Microbacterium nematophilum CBX102. 6 hours of exposure.
  Associated_with: Life_stage: WBls:0000035
  Remark: Probes that were induced more than twofold in at least two of three replicates and were also induced on average are included in this cluster.
    Type: Bacteria Infection