WormBase Tree Display for Gene: WBGene00009215

WBGene00009215 SMap: S_parent: Sequence: F28D1
  Identity: Version: 2
    Name: CGC_name: thn-2
      Sequence_name: F28D1.5
      Molecular_name: F28D1.5
        F28D1.5.1
        CE05745
      Other_name: CELE_F28D1.5 Accession_evidence: NDB BX284604
      Public_name: thn-2
    DB_info: Database: AceView gene 4N149
        WormQTL gene WBGene00009215
        WormFlux gene WBGene00009215
        NDB locus_tag CELE_F28D1.5
        Panther gene CAEEL|WormBase=WBGene00009215|UniProtKB=Q19876
          family PTHR31013
        NCBI gene 178187
        RefSeq protein NM_069961.6
        TREEFAM TREEFAM_ID TF315390
        TrEMBL UniProtAcc Q19876
        UniProt_GCRP UniProtAcc Q19876
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 25 Aug 2004 11:46:28 WBPerson1971 Name_change: CGC_name: thn-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: thn
    Allele (28)
    RNASeq_FPKM (74)
    GO_annotation: 00066203
      00066204
      00066205
      00066206
    Ortholog (36)
    Paralog: WBGene00009213 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00009214 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
      WBGene00021999 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00009858 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00021992 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Involved in defense response to Gram-negative bacterium and defense response to Gram-positive bacterium. Predicted to be located in extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F28D1.5
    Corresponding_transcript: F28D1.5.1
    Other_sequence: CBC01692_1
      MC00876
      MCC01395_1
      CR01128
      CJC02222_2
      CRC11906_1
      CJC00255_1
    Associated_feature: WBsf229285
  Experimental_info: RNAi_result: WBRNAi00094542 Inferred_automatically: RNAi_primary
      WBRNAi00045830 Inferred_automatically: RNAi_primary
      WBRNAi00078263 Inferred_automatically: RNAi_primary
      WBRNAi00070075 Inferred_automatically: RNAi_primary
      WBRNAi00014049 Inferred_automatically: RNAi_primary
      WBRNAi00031527 Inferred_automatically: RNAi_primary
      WBRNAi00075934 Inferred_automatically: RNAi_primary
      WBRNAi00094567 Inferred_automatically: RNAi_primary
      WBRNAi00078264 Inferred_automatically: RNAi_primary
      WBRNAi00094552 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1149737
      Expr2017386
      Expr2035523
    Drives_construct: WBCnstr00032364
    Construct_product: WBCnstr00032364
    Microarray_results (15)
    Expression_cluster (336)
    Interaction (209)
    WBProcess: WBbiopr:00000039
  Map_info: Map: IV Position: 5.8945 Error: 0.002435
    Positive: Positive_clone: F28D1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027722
    WBPaper00028482
    WBPaper00032276
    WBPaper00036653
    WBPaper00041339
    WBPaper00042178
    WBPaper00042367
    WBPaper00064229
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene