WormBase Tree Display for Gene: WBGene00006984
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| WBGene00006984 | SMap | S_parent | Sequence | F54D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | zig-7 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F54D7.4 | ||||||||
| Molecular_name | F54D7.4 | ||||||||
| F54D7.4.1 | |||||||||
| CE33929 | |||||||||
| Other_name | CELE_F54D7.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | zig-7 | ||||||||
| DB_info | Database | AceView | gene | 1F360 | |||||
| WormQTL | gene | WBGene00006984 | |||||||
| WormFlux | gene | WBGene00006984 | |||||||
| NDB | locus_tag | CELE_F54D7.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006984|UniProtKB=O44730 | |||||||
| family | PTHR10075 | ||||||||
| NCBI | gene | 172096 | |||||||
| RefSeq | protein | NM_059050.7 | |||||||
| SwissProt | UniProtAcc | O44730 | |||||||
| TREEFAM | TREEFAM_ID | TF315796 | |||||||
| UniProt_GCRP | UniProtAcc | O44730 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:44 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | zig | ||||||||
| Allele (27) | |||||||||
| Strain | WBStrain00032489 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033215 | ||||||||
| 00033216 | |||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00004370 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00006978 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00006979 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006980 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006981 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006983 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021305 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WBGene00017184 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | zig-7 encodes a predicted secreted protein that is a member of the immunoglobulin superfamily of proteins; loss of zig-7 activity via RNAi has been reported to result in aldicarb resistance; a zig-7::gfp reporter fusion is expressed in body wall muscle. | Paper_evidence | WBPaper00005064 | |||||
| WBPaper00026667 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 14 Jan 2008 00:00:00 | ||||||||
| Automated_description | Predicted to be located in extracellular region. Expressed in body wall musculature. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54D7.4 | |||||||
| Corresponding_CDS_history | F54D7.4:wp99 | ||||||||
| Corresponding_transcript | F54D7.4.1 | ||||||||
| Other_sequence (21) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Chronogram1726 | ||||||||
| Expr1753 | |||||||||
| Expr4935 | |||||||||
| Expr6173 | |||||||||
| Expr1016574 | |||||||||
| Expr1032985 | |||||||||
| Expr1152123 | |||||||||
| Expr2018146 | |||||||||
| Expr2036283 | |||||||||
| Drives_construct | WBCnstr00001468 | ||||||||
| WBCnstr00003350 | |||||||||
| WBCnstr00012348 | |||||||||
| WBCnstr00034051 | |||||||||
| Construct_product | WBCnstr00034051 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (166) | |||||||||
| Interaction | WBInteraction000176902 | ||||||||
| WBInteraction000264644 | |||||||||
| WBInteraction000271782 | |||||||||
| WBInteraction000300931 | |||||||||
| WBInteraction000412507 | |||||||||
| WBInteraction000437471 | |||||||||
| WBInteraction000455816 | |||||||||
| WBInteraction000469809 | |||||||||
| WBInteraction000469810 | |||||||||
| WBInteraction000469816 | |||||||||
| Map_info | Map | I | Position | -0.732036 | Error | 0.002607 | |||
| Positive | Positive_clone | F54D7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003949 | ||||||||
| WBPaper00005064 | |||||||||
| WBPaper00019643 | |||||||||
| WBPaper00022971 | |||||||||
| WBPaper00024192 | |||||||||
| WBPaper00024193 | |||||||||
| WBPaper00028335 | |||||||||
| WBPaper00031003 | |||||||||
| WBPaper00033099 | |||||||||
| WBPaper00035166 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
