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WormBase Tree Display for Gene: WBGene00018971

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Name Class

WBGene00018971SMapS_parentSequenceF56D6
IdentityVersion2
NameCGC_nameclec-67Person_evidenceWBPerson261
WBPerson655
Sequence_nameF56D6.2
Molecular_nameF56D6.2
F56D6.2.1
CE31546
F56D6.2.2
Other_nameCELE_F56D6.2Accession_evidenceNDBBX284604
Public_nameclec-67
DB_infoDatabaseAceViewgene4E687
WormQTLgeneWBGene00018971
WormFluxgeneWBGene00018971
NDBlocus_tagCELE_F56D6.2
PanthergeneCAEEL|WormBase=WBGene00018971|UniProtKB=Q8ITX4
familyPTHR23062
NCBIgene177151
RefSeqproteinNM_068036.7
TREEFAMTREEFAM_IDTF317818
TrEMBLUniProtAccQ8ITX4
UniProt_GCRPUniProtAccQ8ITX4
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
228 Sep 2005 17:40:12WBPerson2970Name_changeCGC_nameclec-67
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (51)
StrainWBStrain00032778
RNASeq_FPKM (74)
GO_annotation00105474
Ortholog (24)
Paralog (45)
Structured_descriptionConcise_descriptionclec-67 encodes a C-type lectin; clec-67 expression is upregulated in response to bacterial infection; clec-67 is expressed in the intestine and its expression is regulated by the ELT-2 GATA transcription factor.Paper_evidenceWBPaper00028945
WBPaper00041211
Curator_confirmedWBPerson1843
Date_last_updated19 Feb 2014 00:00:00
Automated_descriptionInvolved in PERK-mediated unfolded protein response. Expressed in intestine.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSF56D6.2
Corresponding_CDS_historyF56D6.2:wp82
Corresponding_transcriptF56D6.2.1
F56D6.2.2
Other_sequenceJI459262.1
Associated_featureWBsf645894
WBsf228136
WBsf228137
WBsf228138
WBsf228139
Experimental_infoRNAi_resultWBRNAi00020639Inferred_automaticallyRNAi_primary
WBRNAi00032963Inferred_automaticallyRNAi_primary
WBRNAi00048721Inferred_automaticallyRNAi_primary
Expr_patternExpr1000
Expr4512
Expr1038189
Expr1152473
Expr2010200
Expr2028441
Drives_constructWBCnstr00012070
WBCnstr00026155
Construct_productWBCnstr00026155
Microarray_results (17)
Expression_cluster (320)
Interaction (19)
WBProcessWBbiopr:00000039
WBbiopr:00000092
Map_infoMapIVPosition-1.69011Error0.017302
PositivePositive_cloneF56D6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (11)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene