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WormBase Tree Display for Gene: WBGene00009429

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Name Class

WBGene00009429SMapS_parentSequenceF35E12
IdentityVersion2
NameCGC_nameirg-5Person_evidenceWBPerson9709
Sequence_nameF35E12.5
Molecular_nameF35E12.5
F35E12.5.1
CE38510
Other_nameCELE_F35E12.5Accession_evidenceNDBBX284605
Public_nameirg-5
DB_infoDatabaseAceViewgene5O218
WormQTLgeneWBGene00009429
WormFluxgeneWBGene00009429
NDBlocus_tagCELE_F35E12.5
PanthergeneCAEEL|WormBase=WBGene00009429|UniProtKB=O02357
familyPTHR21447
NCBIgene185307
RefSeqproteinNM_001380807.2
TREEFAMTREEFAM_IDTF316592
TrEMBLUniProtAccO02357
UniProt_GCRPUniProtAccO02357
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
228 Sep 2016 15:57:39WBPerson2970Name_changeCGC_nameirg-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classirg
Allele (24)
StrainWBStrain00033153
RNASeq_FPKM (74)
GO_annotation00026882
00026883
Contained_in_operonCEOP5575
Ortholog (48)
Paralog (17)
Structured_descriptionAutomated_descriptionInvolved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSF35E12.5
Corresponding_transcriptF35E12.5.1
Associated_featureWBsf718448
WBsf1001883
WBsf1020761
WBsf234856
Experimental_infoRNAi_resultWBRNAi00014332Inferred_automaticallyRNAi_primary
WBRNAi00082471Inferred_automaticallyRNAi_primary
WBRNAi00046337Inferred_automaticallyRNAi_primary
WBRNAi00082614Inferred_automaticallyRNAi_primary
WBRNAi00078256Inferred_automaticallyRNAi_primary
Expr_patternExpr15756
Expr1012889
Expr1150225
Expr2012820
Drives_constructWBCnstr00005986
WBCnstr00017593
WBCnstr00032194
Construct_productWBCnstr00032194
Microarray_results (16)
Expression_cluster (371)
Interaction (43)
Map_infoMapVPosition5.58641
PositivePositive_cloneF35E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (16)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene