WormBase Tree Display for Gene: WBGene00021873
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| WBGene00021873 | SMap | S_parent | Sequence | Y54G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-82 | Person_evidence | WBPerson261 | |||||
| WBPerson655 | |||||||||
| Sequence_name | Y54G2A.8 | ||||||||
| Molecular_name | Y54G2A.8a | ||||||||
| Y54G2A.8a.1 | |||||||||
| CE31655 | |||||||||
| Y54G2A.8b | |||||||||
| CE37728 | |||||||||
| Y54G2A.8b.1 | |||||||||
| Other_name | CELE_Y54G2A.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | clec-82 | ||||||||
| DB_info | Database | AceView | gene | 4D603 | |||||
| WormQTL | gene | WBGene00021873 | |||||||
| WormFlux | gene | WBGene00021873 | |||||||
| NDB | locus_tag | CELE_Y54G2A.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021873|UniProtKB=H2L0R0 | |||||||
| family | PTHR23062 | ||||||||
| NCBI | gene | 177064 | |||||||
| RefSeq | protein | NM_001392272.1 | |||||||
| NM_001028336.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF317818 | |||||||
| TrEMBL | UniProtAcc | H2L0R0 | |||||||
| Q5W7E6 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0R0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-82 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (64) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023285 | ||||||||
| Ortholog (92) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Automated_description | Involved in defense response to Gram-positive bacterium. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G2A.8a | |||||||
| Y54G2A.8b | |||||||||
| Corresponding_CDS_history | Y54G2A.8:wp82 | ||||||||
| Y54G2A.8:wp134 | |||||||||
| Corresponding_transcript | Y54G2A.8a.1 | ||||||||
| Y54G2A.8b.1 | |||||||||
| Associated_feature | WBsf228063 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00057473 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057472 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026991 | ||||||||
| Expr1160918 | |||||||||
| Expr2010213 | |||||||||
| Expr2028454 | |||||||||
| Drives_construct | WBCnstr00024421 | ||||||||
| Construct_product | WBCnstr00024421 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (187) | |||||||||
| Map_info | Map | IV | Position | -6.73209 | Error | 0.000593 | |||
| Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031686 | ||||||||
| WBPaper00061669 | |||||||||
| WBPaper00065718 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
