WormBase Tree Display for Gene: WBGene00009221
expand all nodes | collapse all nodes | view schema
| WBGene00009221 | SMap | S_parent | Sequence | F28F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acs-2 | Person_evidence | WBPerson7030 | |||||
| WBPerson2239 | |||||||||
| WBPerson237 | |||||||||
| Sequence_name | F28F8.2 | ||||||||
| Molecular_name | F28F8.2 | ||||||||
| F28F8.2.1 | |||||||||
| CE09756 | |||||||||
| Other_name | CELE_F28F8.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | acs-2 | ||||||||
| DB_info | Database | AceView | gene | 5Q49 | |||||
| WormQTL | gene | WBGene00009221 | |||||||
| WormFlux | gene | WBGene00009221 | |||||||
| NDB | locus_tag | CELE_F28F8.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009221|UniProtKB=O18693 | |||||||
| family | PTHR43201 | ||||||||
| NCBI | gene | 3565680 | |||||||
| RefSeq | protein | NM_074468.6 | |||||||
| TREEFAM | TREEFAM_ID | TF313466 | |||||||
| TrEMBL | UniProtAcc | O18693 | |||||||
| UniProt_GCRP | UniProtAcc | O18693 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 23 Mar 2005 15:36:05 | WBPerson2970 | Name_change | CGC_name | acs-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acs | ||||||||
| Allele (76) | |||||||||
| Strain | WBStrain00032584 | ||||||||
| Component_of_genotype | WBGenotype00000151 | ||||||||
| WBGenotype00000152 | |||||||||
| WBGenotype00000153 | |||||||||
| WBGenotype00000154 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00031987 | ||||||||
| 00031988 | |||||||||
| 00031989 | |||||||||
| 00031990 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00016849 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00018269 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018579 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018488 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006351 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007969 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012356 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013440 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | acs-2 encodes an acyl-CoA synthetase; by homology, ACS-2 is predicted to catalyze conversion of a fatty acid to Acyl-CoA for subsequent beta oxidation; accordingly, loss of acs-2 activity via RNAi results in defects in fat metabolism; an ACS-2::GFP reporter fusion protein is widely expressed and appears to localize to mitochondria; acs-2 expression is positively regulated by the NHR-49 nuclear hormone receptor. | Paper_evidence | WBPaper00005655 | |||||
| WBPaper00025114 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Mar 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable medium-chain fatty acid-CoA ligase activity. Involved in fatty acid metabolic process. Located in mitochondrion. Expressed in body wall musculature; hypodermis; intestine; neurons; and pharynx. Is an ortholog of human ACSF2 (acyl-CoA synthetase family member 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:3146 | Homo sapiens | Paper_evidence | WBPaper00039810 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 31 Jul 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28F8.2 | |||||||
| Corresponding_transcript | F28F8.2.1 | ||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf662130 | ||||||||
| WBsf1002313 | |||||||||
| WBsf1021034 | |||||||||
| WBsf233036 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr3469 | ||||||||
| Expr3780 | |||||||||
| Expr1014898 | |||||||||
| Expr1034024 | |||||||||
| Expr1149753 | |||||||||
| Expr2009213 | |||||||||
| Expr2027450 | |||||||||
| Drives_construct | WBCnstr00011406 | ||||||||
| WBCnstr00011655 | |||||||||
| WBCnstr00021644 | |||||||||
| Construct_product | WBCnstr00011406 | ||||||||
| WBCnstr00011655 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (473) | |||||||||
| Interaction (73) | |||||||||
| Map_info | Map | V | Position | 8.35712 | Error | 0.005311 | |||
| Positive | Positive_clone | F28F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (52) | |||||||||
| Picture | WBPicture0000013098 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
