WormBase Tree Display for Gene: WBGene00018461
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| WBGene00018461 | SMap | S_parent | Sequence | F45D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F45D11.16 | |||||||
| Molecular_name | F45D11.16 | ||||||||
| F45D11.16.1 | |||||||||
| CE20794 | |||||||||
| Other_name | CELE_F45D11.16 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F45D11.16 | ||||||||
| DB_info | Database | AceView | gene | 2B308 | |||||
| WormFlux | gene | WBGene00018461 | |||||||
| NDB | locus_tag | CELE_F45D11.16 | |||||||
| NCBI | gene | 173480 | |||||||
| RefSeq | protein | NM_061486.3 | |||||||
| TREEFAM | TREEFAM_ID | TF321359 | |||||||
| TrEMBL | UniProtAcc | G5EFS5 | |||||||
| UniProt_GCRP | UniProtAcc | G5EFS5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (46) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00012267 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00012268 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00013613 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00018459 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00018460 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00022375 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00021195 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021196 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021197 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00044363 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in muscle cell based on microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on proteomic; RNA-seq; and microarray studies. Is affected by sixteen chemicals including Ethanol; sesamin; and stavudine based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF684); Protein of unknown function DUF684; and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F45D11.16 | |||||||
| Corresponding_transcript | F45D11.16.1 | ||||||||
| Associated_feature | WBsf222654 | ||||||||
| WBsf222655 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047370 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014993 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047372 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047371 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032287 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014992 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1151224 | ||||||||
| Drives_construct | WBCnstr00026500 | ||||||||
| Construct_product | WBCnstr00026500 | ||||||||
| Microarray_results | 186801_s_at | ||||||||
| Expression_cluster (132) | |||||||||
| Interaction | WBInteraction000326594 | ||||||||
| WBInteraction000548089 | |||||||||
| WBInteraction000581061 | |||||||||
| WBInteraction000583447 | |||||||||
| Map_info | Positive | Positive_clone | F45D11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -15.5736 | |||||||
| Method | Gene |
