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WormBase Tree Display for Gene: WBGene00020886

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Name Class

WBGene00020886SMapS_parentSequenceT28B4
IdentityVersion2
NameCGC_namettr-6
Sequence_nameT28B4.3
Molecular_nameT28B4.3
T28B4.3.1
CE14325
Other_nameCELE_T28B4.3Accession_evidenceNDBBX284606
Public_namettr-6
DB_infoDatabaseAceViewgeneXH214
WormQTLgeneWBGene00020886
WormFluxgeneWBGene00020886
NDBlocus_tagCELE_T28B4.3
PanthergeneCAEEL|WormBase=WBGene00020886|UniProtKB=O17345
familyPTHR21700
NCBIgene189028
RefSeqproteinNM_076709.6
TREEFAMTREEFAM_IDTF315773
TrEMBLUniProtAccO17345
UniProt_GCRPUniProtAccO17345
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
220 Sep 2007 11:48:01WBPerson2970Name_changeCGC_namettr-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttr
Allele (13)
RNASeq_FPKM (74)
GO_annotation00029646
00029647
00125408
Ortholog (25)
ParalogWBGene00003742Caenorhabditis elegansFrom_analysisPanther
WBGene00007142Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007304Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007535Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007590Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007888Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00008040Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008341Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008628Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008719Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009758Caenorhabditis elegansFrom_analysisPanther
WBGene00009759Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00010225Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010234Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010440Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010538Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010539Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010541Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011284Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011285Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011286Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011450Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011460Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011561Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011571Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011773Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011774Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011894Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012382Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012383Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012849Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00013077Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013078Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013079Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016164Caenorhabditis elegansFrom_analysisPanther
WBGene00016505Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017091Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017374Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017600Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00017667Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017688Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017839Caenorhabditis elegansFrom_analysisPanther
WBGene00018085Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018978Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00018979Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00019203Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020047Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020049Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020335Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020339Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020566Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044788Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00050896Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00044605Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044737Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00023485Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00235391Caenorhabditis elegansFrom_analysisPanther
WBGene00045455Caenorhabditis elegansFrom_analysisPanther
WBGene00044663Caenorhabditis elegansFrom_analysisPanther
WBGene00045245Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022515Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00050892Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionLocated in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST28B4.3
Corresponding_transcriptT28B4.3.1
Other_sequence (99)
Associated_featureWBsf654071
WBsf237497
Experimental_infoRNAi_resultWBRNAi00054380Inferred_automaticallyRNAi_primary
WBRNAi00081190Inferred_automaticallyRNAi_primary
WBRNAi00036069Inferred_automaticallyRNAi_primary
WBRNAi00019381Inferred_automaticallyRNAi_primary
WBRNAi00081194Inferred_automaticallyRNAi_primary
Expr_patternExpr9506
Expr1016353
Expr1039100
Expr1157928
Expr2017625
Expr2035765
Drives_constructWBCnstr00024811
Construct_productWBCnstr00014071
WBCnstr00024811
Microarray_results (19)
Expression_cluster (224)
Interaction (28)
Map_infoMapXPosition-2.751
PositivePositive_cloneT28B4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00034662
WBPaper00038444
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene