WormBase Tree Display for Gene: WBGene00011285
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| WBGene00011285 | SMap | S_parent | Sequence | R90 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-28 | |||||||
| Sequence_name | R90.3 | ||||||||
| Molecular_name | R90.3 | ||||||||
| R90.3.1 | |||||||||
| CE48111 | |||||||||
| Other_name | CELE_R90.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ttr-28 | ||||||||
| DB_info | Database | AceView | gene | 5N386 | |||||
| WormQTL | gene | WBGene00011285 | |||||||
| WormFlux | gene | WBGene00011285 | |||||||
| NDB | locus_tag | CELE_R90.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011285|UniProtKB=Q22035 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 187889 | |||||||
| RefSeq | protein | NM_073825.4 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | Q22035 | |||||||
| UniProt_GCRP | UniProtAcc | Q22035 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-28 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00073838 | ||||||||
| 00118546 | |||||||||
| Contained_in_operon | CEOP5501 | ||||||||
| Ortholog (19) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R90.3 | |||||||
| Corresponding_CDS_history | R90.3:wp235 | ||||||||
| Corresponding_transcript | R90.3.1 | ||||||||
| Other_sequence | Tcir_isotig16547 | ||||||||
| BXC04349_1 | |||||||||
| Tcol_isotig01289 | |||||||||
| MHC08474_1 | |||||||||
| Oden_isotig24020 | |||||||||
| MH01349 | |||||||||
| NB07485 | |||||||||
| Tcol_isotig10411 | |||||||||
| Tcol_isotig01288 | |||||||||
| Associated_feature | WBsf234740 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052059 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017924 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034984 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017771 | ||||||||
| Expr1155692 | |||||||||
| Expr2017593 | |||||||||
| Expr2035732 | |||||||||
| Drives_construct | WBCnstr00030777 | ||||||||
| Construct_product | WBCnstr00030777 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction | WBInteraction000240986 | ||||||||
| WBInteraction000311198 | |||||||||
| WBInteraction000353634 | |||||||||
| WBInteraction000405642 | |||||||||
| WBInteraction000444283 | |||||||||
| Map_info | Map | V | Position | 4.72464 | Error | 0.00046 | |||
| Positive | Positive_clone | R90 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
