WormBase Tree Display for Gene: WBGene00018979

WBGene00018979 SMap: S_parent: Sequence: F56F4
  Identity: Version: 2
    Name: CGC_name: ttr-55
      Sequence_name: F56F4.2
      Molecular_name: F56F4.2
        F56F4.2.1
        CE48266
      Other_name: CELE_F56F4.2 Accession_evidence: NDB BX284601
      Public_name: ttr-55
    DB_info: Database: AceView gene 1G723
        WormQTL gene WBGene00018979
        WormFlux gene WBGene00018979
        NDB locus_tag CELE_F56F4.2
        Panther gene CAEEL|WormBase=WBGene00018979|UniProtKB=A8DZ30
          family PTHR21700
        NCBI gene 186397
        RefSeq protein NM_059371.5
        TREEFAM TREEFAM_ID TF315773
        TrEMBL UniProtAcc A8DZ30
        UniProt_GCRP UniProtAcc A8DZ30
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 Sep 2007 11:48:01 WBPerson2970 Name_change: CGC_name: ttr-55
      Split_into: WBGene00050896
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    Allele (17)
    RNASeq_FPKM (74)
    GO_annotation: 00005237
      00123938
    Ortholog: WBGene00039313 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00083461 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00139125 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00161868 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      CSP26.g3187 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP40.g307 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Csp11.Scaffold58.g344 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_16155 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001974 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrI_pilon.g1080 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (62)
    Structured_description: Automated_description: Predicted to be located in cell surface and extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F56F4.2
    Corresponding_CDS_history: F56F4.2:wp182
      F56F4.2:wp221
      F56F4.2:wp237
    Corresponding_transcript: F56F4.2.1
  Experimental_info: RNAi_result: WBRNAi00003812 Inferred_automatically: RNAi_primary
      WBRNAi00048754 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018992
      Expr1152500
    Drives_construct: WBCnstr00026153
    Construct_product: WBCnstr00026153
    Microarray_results (13)
    Expression_cluster (27)
    Interaction: WBInteraction000179140
      WBInteraction000259038
      WBInteraction000273664
      WBInteraction000307246
      WBInteraction000326230
      WBInteraction000357606
      WBInteraction000366020
  Map_info: Map: I Position: 0.809717 Error: 0.00369
    Positive: Positive_clone: F56F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene