WormBase Tree Display for Gene: WBGene00013078
expand all nodes | collapse all nodes | view schema
| WBGene00013078 | SMap | S_parent | Sequence | Y51A2D | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-25 | |||||||
| Sequence_name | Y51A2D.10 | ||||||||
| Molecular_name | Y51A2D.10a | ||||||||
| Y51A2D.10a.1 | |||||||||
| CE19206 | |||||||||
| Y51A2D.10b | |||||||||
| CE45890 | |||||||||
| Y51A2D.10b.1 | |||||||||
| Other_name | CELE_Y51A2D.10 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ttr-25 | ||||||||
| DB_info | Database | AceView | gene | 5T37 | |||||
| WormQTL | gene | WBGene00013078 | |||||||
| WormFlux | gene | WBGene00013078 | |||||||
| NDB | locus_tag | CELE_Y51A2D.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013078|UniProtKB=Q9XXQ6 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 180210 | |||||||
| RefSeq | protein | NM_001269886.3 | |||||||
| NM_001269885.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | F3Y5P3 | |||||||
| Q9XXQ6 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XXQ6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-25 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (39) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00008574 | ||||||||
| 00120034 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y51A2D.10a | |||||||
| Y51A2D.10b | |||||||||
| Corresponding_transcript | Y51A2D.10a.1 | ||||||||
| Y51A2D.10b.1 | |||||||||
| Other_sequence | MCC00307_1 | ||||||||
| Associated_feature | WBsf647684 | ||||||||
| WBsf1002936 | |||||||||
| WBsf1002937 | |||||||||
| WBsf1021496 | |||||||||
| WBsf1021497 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057126 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020866 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019579 | ||||||||
| Expr1160574 | |||||||||
| Expr2017590 | |||||||||
| Expr2035729 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (205) | |||||||||
| Interaction (181) | |||||||||
| Map_info | Map | V | Position | 16.8848 | Error | 0.006646 | |||
| Positive | Positive_clone | Y51A2D | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033099 | ||||||||
| WBPaper00064841 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
