WormBase Tree Display for Gene: WBGene00017688
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| WBGene00017688 | SMap | S_parent | Sequence | F22A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-35 | |||||||
| Sequence_name | F22A3.2 | ||||||||
| Molecular_name | F22A3.2 | ||||||||
| F22A3.2.1 | |||||||||
| CE38505 | |||||||||
| Other_name | CELE_F22A3.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ttr-35 | ||||||||
| DB_info | Database | AceView | gene | XH131 | |||||
| WormQTL | gene | WBGene00017688 | |||||||
| WormFlux | gene | WBGene00017688 | |||||||
| NDB | locus_tag | CELE_F22A3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017688|UniProtKB=Q19694 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 180925 | |||||||
| RefSeq | protein | NM_076697.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | Q19694 | |||||||
| UniProt_GCRP | UniProtAcc | Q19694 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-35 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (12) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00065511 | ||||||||
| 00123010 | |||||||||
| Contained_in_operon | CEOPX170 | ||||||||
| Ortholog (28) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F22A3.2 | |||||||
| Corresponding_CDS_history | F22A3.2:wp142 | ||||||||
| Corresponding_transcript | F22A3.2.1 | ||||||||
| Other_sequence (53) | |||||||||
| Associated_feature | WBsf1005582 | ||||||||
| WBsf1005583 | |||||||||
| WBsf1023106 | |||||||||
| WBsf235843 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045263 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00081118 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013720 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017267 | ||||||||
| Expr1037593 | |||||||||
| Expr1149193 | |||||||||
| Expr2017601 | |||||||||
| Expr2035740 | |||||||||
| Drives_construct | WBCnstr00027100 | ||||||||
| Construct_product | WBCnstr00027100 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction | WBInteraction000209691 | ||||||||
| WBInteraction000330297 | |||||||||
| WBInteraction000340674 | |||||||||
| WBInteraction000348882 | |||||||||
| WBInteraction000383346 | |||||||||
| WBInteraction000388379 | |||||||||
| WBInteraction000397488 | |||||||||
| WBInteraction000433578 | |||||||||
| WBInteraction000445478 | |||||||||
| WBInteraction000449752 | |||||||||
| Map_info | Map | X | Position | -2.86882 | |||||
| Positive | Positive_clone | F22A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034662 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
