WormBase Tree Display for Gene: WBGene00010539

WBGene00010539 SMap: S_parent: Sequence: K03H1
  Identity: Version: 2
    Name: CGC_name: ttr-2
      Sequence_name: K03H1.4
      Molecular_name: K03H1.4
        K03H1.4.1
        CE00475
      Other_name: CELE_K03H1.4 Accession_evidence: NDB BX284603
      Public_name: ttr-2
    DB_info: Database: AceView gene 3L17
        WormQTL gene WBGene00010539
        WormFlux gene WBGene00010539
        NDB locus_tag CELE_K03H1.4
        Panther gene CAEEL|WormBase=WBGene00010539|UniProtKB=P34500
          family PTHR21700
        NCBI gene 176403
        RefSeq protein NM_066802.7
        SwissProt UniProtAcc P34500
        TREEFAM TREEFAM_ID TF315773
        UniProt_GCRP UniProtAcc P34500
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 20 Sep 2007 11:48:01 WBPerson2970 Name_change: CGC_name: ttr-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    Allele (21)
    RNASeq_FPKM (74)
    GO_annotation: 00042703
      00042704
      00117898
    Ortholog (23)
    Paralog (62)
    Structured_description: Concise_description: K03H1.4 encodes a protein containing a predicted signal sequence followed by a transthyretin-like domain; the product of K03H1.4 belongs to a family of apparently nematode-specific proteins whose function is not yet known. Paper_evidence: WBPaper00002969
          Curator_confirmed: WBPerson1843
          Date_last_updated: 04 Sep 2007 00:00:00
      Automated_description: Predicted to be located in cell surface and extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K03H1.4
    Corresponding_transcript: K03H1.4.1
    Other_sequence (16)
    Associated_feature: WBsf645527
      WBsf993848
      WBsf1015695
      WBsf225645
  Experimental_info: RNAi_result: WBRNAi00049853 Inferred_automatically: RNAi_primary
      WBRNAi00006712 Inferred_automatically: RNAi_primary
      WBRNAi00046853 Inferred_automatically: RNAi_primary
      WBRNAi00016553 Inferred_automatically: RNAi_primary
      WBRNAi00033427 Inferred_automatically: RNAi_primary
      WBRNAi00000310 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram894
      Chronogram1301
      Chronogram1517
      Expr1012016
      Expr1034597
      Expr1153561
      Expr2017595
      Expr2035734
    Drives_construct: WBCnstr00031343
    Construct_product: WBCnstr00031343
    Microarray_results (19)
    Expression_cluster (232)
    Interaction (171)
  Map_info: Map: III Position: 1.23456 Error: 0.012844
    Positive: Positive_clone: K03H1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00002969
    WBPaper00062002
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene