WormBase Tree Display for Gene: WBGene00010541

WBGene00010541 SMap: S_parent: Sequence: K03H1
  Identity: Version: 2
    Name: CGC_name: ttr-1 Person_evidence: WBPerson1157
      Sequence_name: K03H1.6
      Molecular_name: K03H1.6
        K03H1.6.1
        CE00476
      Other_name: CELE_K03H1.6 Accession_evidence: NDB BX284603
      Public_name: ttr-1
    DB_info: Database: AceView gene 3L19
        WormQTL gene WBGene00010541
        WormFlux gene WBGene00010541
        NDB locus_tag CELE_K03H1.6
        Panther gene CAEEL|WormBase=WBGene00010541|UniProtKB=P34502
          family PTHR21700
        NCBI gene 186958
        RefSeq protein NM_066803.6
        SwissProt UniProtAcc P34502
        TREEFAM TREEFAM_ID TF315773
        UniProt_GCRP UniProtAcc P34502
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 31 Aug 2005 14:07:05 WBPerson2970 Name_change: CGC_name: ttr-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    Allele (30)
    Strain: WBStrain00036876
    RNASeq_FPKM (74)
    GO_annotation: 00042710
      00042711
      00117900
    Ortholog (14)
    Paralog (62)
    Structured_description: Concise_description: ttr-1 encodes a protein containing a predicted signal sequence followed by a transthyretin-like domain; although TTR-1 belongs to a family of apparently nematode-specific proteins whose function is not yet known, loss of ttr-1 function via RNAi can result in enhanced dauer formation and daf-16-dependent lifespan extension. Paper_evidence: WBPaper00002969
            WBPaper00026715
          Curator_confirmed: WBPerson1843
          Date_last_updated: 14 Dec 2007 00:00:00
      Automated_description: Predicted to be located in cell surface and extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K03H1.6
    Corresponding_transcript: K03H1.6.1
    Other_sequence: CBC00423_1
    Associated_feature: WBsf645528
      WBsf993849
      WBsf1015696
      WBsf225646
  Experimental_info: RNAi_result: WBRNAi00063976 Inferred_automatically: RNAi_primary
      WBRNAi00016555 Inferred_automatically: RNAi_primary
      WBRNAi00049856 Inferred_automatically: RNAi_primary
      WBRNAi00006360 Inferred_automatically: RNAi_primary
      WBRNAi00033927 Inferred_automatically: RNAi_primary
      WBRNAi00063975 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014874
      Expr1153563
      Expr2017584
      Expr2035723
    Drives_construct: WBCnstr00031341
    Construct_product: WBCnstr00031341
    Microarray_results (18)
    Expression_cluster (126)
    Interaction (83)
  Map_info: Map: III Position: 1.26875 Error: 0.01413
    Positive: Positive_clone: K03H1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00002969
    WBPaper00026715
    WBPaper00044760
    WBPaper00047495
    WBPaper00052839
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene