WormBase Tree Display for Gene: WBGene00008341
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| WBGene00008341 | SMap | S_parent | Sequence | C56A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-44 | |||||||
| Sequence_name | C56A3.2 | ||||||||
| Molecular_name | C56A3.2a | ||||||||
| C56A3.2a.1 | |||||||||
| CE09030 | |||||||||
| C56A3.2b | |||||||||
| CE45479 | |||||||||
| C56A3.2b.1 | |||||||||
| Other_name | CELE_C56A3.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ttr-44 | ||||||||
| DB_info | Database | AceView | gene | 5O10 | |||||
| WormQTL | gene | WBGene00008341 | |||||||
| WormFlux | gene | WBGene00008341 | |||||||
| NDB | locus_tag | CELE_C56A3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008341|UniProtKB=Q18878 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 179835 | |||||||
| RefSeq | protein | NM_001269585.3 | |||||||
| NM_001380804.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | Q18878 | |||||||
| E3W741 | |||||||||
| UniProt_GCRP | UniProtAcc | Q18878 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-44 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00008201 | ||||||||
| 00116266 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C56A3.2a | |||||||
| C56A3.2b | |||||||||
| Corresponding_transcript | C56A3.2a.1 | ||||||||
| C56A3.2b.1 | |||||||||
| Other_sequence (165) | |||||||||
| Associated_feature | WBsf653319 | ||||||||
| WBsf234821 | |||||||||
| WBsf234822 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012448 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043252 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030190 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010927 | ||||||||
| Expr1147232 | |||||||||
| Expr2017611 | |||||||||
| Expr2035749 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (317) | |||||||||
| Map_info | Map | V | Position | 5.42318 | Error | 0.012715 | |||
| Positive | Positive_clone | C56A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064229 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
