WormBase Tree Display for Gene: WBGene00008341

WBGene00008341 SMap: S_parent: Sequence: C56A3
  Identity: Version: 2
    Name: CGC_name: ttr-44
      Sequence_name: C56A3.2
      Molecular_name: C56A3.2a
        C56A3.2a.1
        CE09030
        C56A3.2b
        CE45479
        C56A3.2b.1
      Other_name: CELE_C56A3.2 Accession_evidence: NDB BX284605
      Public_name: ttr-44
    DB_info: Database: AceView gene 5O10
        WormQTL gene WBGene00008341
        WormFlux gene WBGene00008341
        NDB locus_tag CELE_C56A3.2
        Panther gene CAEEL|WormBase=WBGene00008341|UniProtKB=Q18878
          family PTHR21700
        NCBI gene 179835
        RefSeq protein NM_001269585.3
            NM_001380804.1
        TREEFAM TREEFAM_ID TF315773
        TrEMBL UniProtAcc Q18878
            E3W741
        UniProt_GCRP UniProtAcc Q18878
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 20 Sep 2007 11:48:01 WBPerson2970 Name_change: CGC_name: ttr-44
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    Allele (29)
    RNASeq_FPKM (74)
    GO_annotation: 00008201
      00116266
    Ortholog (30)
    Paralog (62)
    Structured_description: Automated_description: Predicted to be located in cell surface and extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C56A3.2a
      C56A3.2b
    Corresponding_transcript: C56A3.2a.1
      C56A3.2b.1
    Other_sequence: HC01183
      OOC03431_1
      JI469618.1
      AI151563.1
      Oden_isotig24818
      HBC16243_1
      HGC02529_1
      AIC00006_1
      Tcol_isotig20077
      ASC08144_1
      TDC02490_1
      EX827567.1
      Oden_isotig07535
      JI474510.1
      BF918289.1
      MI01142
      BG467950.1
      HCC01741_1
      Oden_isotig07537
      CV198819.1
      Acan_isotig04538
      TCC00464_1
      AYC00374_1
      Dviv_isotig15206
      HC01798
      BF114570.1
      DW718317.1
      MH01186
      CB043509.1
      GP01977
      ACC16741_1
      AE00089
      GR977578.1
      AE00078
      Acan_isotig15521
      Dviv_isotig18464
      Acan_isotig12278
      PT02804
      OVC07946_1
      BU088099.1
      AI111324.1
      BG310564.1
      AYC00628_1
      JI483522.1
      CSC01759_1
      HCC00831_1
      CRC11492_1
      AI053002.1
      CBC02084_2
      AS16109
      GO249626.1
      JI176497.1
      AM743203.1
      Oden_isotig25585
      ES413635.1
      Acan_isotig02654
      Oden_isotig26530
      CV199027.1
      MJ00367
      Oden_isotig07536
      MI02140
      EX556956.1
      Dviv_isotig15207
      CR06858
      CV201141.1
      GR978538.1
      Tcir_isotig09536
      AA934343.1
      JI465153.1
      AS05255
      EX557485.1
      MC02435
      ES740091.1
      Oden_isotig23585
      Oden_isotig22638
      SC00179
      RS06370
      BXC00403_1
      Acan_isotig14958
      PVC00024_1
      EH005184.1
      Tcol_isotig13250
      BMC11975_1
      HC00465
      SSC02724_1
      JI181898.1
      HC01295
      ACC00526_1
      JI239642.1
      PPC03336_1
      EX559447.1
      MPC00973_1
      NAC02051_1
      MHC05454_1
      ES672790.1
      NBC09342_1
      Dviv_isotig18465
      AE00856
      MJC03280_1
      Dviv_isotig27298
      GR977235.1
      HO243962.1
      HCC01741_2
      GR977759.1
      Oden_isotig21079
      AI151720.1
      NAC00622_1
      JI466668.1
      MIC00049_1
      Tcol_isotig10065
      AA756893.1
      PPC03006_1
      OOC03116_1
      BF599252.1
      GR979272.1
      PPC17263_1
      RSC00461_1
      FE915335.1
      TX00272
      AS05661
      BG310530.1
      CV198692.1
      GPC02981_1
      PPC09928_1
      BE721027.1
      CJC05998_1
      HCC01741_3
      AI313811.1
      Tcir_isotig09382
      NBC04279_1
      GRC01168_1
      Acan_isotig04539
      Name_isotig08275
      ACC12747_1
      AE01903
      GR978952.1
      AA294023.1
      FD514701.1
      ES412970.1
      JK315387.1
      TDC00185_1
      BF599223.1
      EX559334.1
      OOC00471_1
      Acan_isotig11466
      AI368335.1
      GW407902.1
      ACC01089_1
      HCC02240_1
      SS01143
      CV199119.1
      ACC07682_1
      PVC00081_1
      CB043518.1
      HCC00775_1
      MI00763
      AM691120.1
      HG03094
      SC00474
      MI01140
      MCC01091_1
      ES412845.1
      EL889639.1
      HC02596
      OVC00341_1
    Associated_feature: WBsf653319
      WBsf234821
      WBsf234822
  Experimental_info: RNAi_result: WBRNAi00012448 Inferred_automatically: RNAi_primary
      WBRNAi00043252 Inferred_automatically: RNAi_primary
      WBRNAi00030190 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010927
      Expr1147232
      Expr2017611
      Expr2035749
    Microarray_results (17)
    Expression_cluster (317)
  Map_info: Map: V Position: 5.42318 Error: 0.012715
    Positive: Positive_clone: C56A3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00064229
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene