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WormBase Tree Display for Gene: WBGene00008341

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Name Class

WBGene00008341SMapS_parentSequenceC56A3
IdentityVersion2
NameCGC_namettr-44
Sequence_nameC56A3.2
Molecular_nameC56A3.2a
C56A3.2a.1
CE09030
C56A3.2b
CE45479
C56A3.2b.1
Other_nameCELE_C56A3.2Accession_evidenceNDBBX284605
Public_namettr-44
DB_infoDatabaseAceViewgene5O10
WormQTLgeneWBGene00008341
WormFluxgeneWBGene00008341
NDBlocus_tagCELE_C56A3.2
PanthergeneCAEEL|WormBase=WBGene00008341|UniProtKB=Q18878
familyPTHR21700
NCBIgene179835
RefSeqproteinNM_001269585.3
NM_001380804.1
TREEFAMTREEFAM_IDTF315773
TrEMBLUniProtAccQ18878
E3W741
UniProt_GCRPUniProtAccQ18878
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 Sep 2007 11:48:01WBPerson2970Name_changeCGC_namettr-44
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttr
Allele (29)
RNASeq_FPKM (74)
GO_annotation00008201
00116266
Ortholog (30)
ParalogWBGene00003742Caenorhabditis elegansFrom_analysisPanther
WBGene00007142Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007304Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007535Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007590Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007888Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00008040Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018978Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00020886Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012383Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008719Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010225Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022515Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017688Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011460Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017667Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012382Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013077Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013078Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020049Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010234Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013079Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010541Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010539Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017839Caenorhabditis elegansFrom_analysisPanther
WBGene00020047Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010538Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009758Caenorhabditis elegansFrom_analysisPanther
WBGene00044737Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020335Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011561Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008628Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020566Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00045245Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020339Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044605Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044788Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017374Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018085Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010440Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011773Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011774Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018979Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00050896Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00050892Caenorhabditis elegansFrom_analysisPanther
WBGene00011894Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011285Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009759Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00012849Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00017600Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00011284Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011450Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011286Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019203Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00023485Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00235391Caenorhabditis elegansFrom_analysisPanther
WBGene00017091Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045455Caenorhabditis elegansFrom_analysisPanther
WBGene00044663Caenorhabditis elegansFrom_analysisPanther
WBGene00016164Caenorhabditis elegansFrom_analysisPanther
WBGene00011571Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016505Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in cell surface and extracellular region.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC56A3.2a
C56A3.2b
Corresponding_transcriptC56A3.2a.1
C56A3.2b.1
Other_sequence (165)
Associated_featureWBsf653319
WBsf234821
WBsf234822
Experimental_infoRNAi_resultWBRNAi00012448Inferred_automaticallyRNAi_primary
WBRNAi00043252Inferred_automaticallyRNAi_primary
WBRNAi00030190Inferred_automaticallyRNAi_primary
Expr_patternExpr1010927
Expr1147232
Expr2017611
Expr2035749
Microarray_results (17)
Expression_cluster (317)
Map_infoMapVPosition5.42318Error0.012715
PositivePositive_cloneC56A3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00064229
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene