WormBase Tree Display for Gene: WBGene00020886
expand all nodes | collapse all nodes | view schema
WBGene00020886 | SMap | S_parent | Sequence | T28B4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ttr-6 | |||||||
Sequence_name | T28B4.3 | ||||||||
Molecular_name | T28B4.3 | ||||||||
T28B4.3.1 | |||||||||
CE14325 | |||||||||
Other_name | CELE_T28B4.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | ttr-6 | ||||||||
DB_info | Database | AceView | gene | XH214 | |||||
WormQTL | gene | WBGene00020886 | |||||||
WormFlux | gene | WBGene00020886 | |||||||
NDB | locus_tag | CELE_T28B4.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020886|UniProtKB=O17345 | |||||||
family | PTHR21700 | ||||||||
NCBI | gene | 189028 | |||||||
RefSeq | protein | NM_076709.6 | |||||||
TREEFAM | TREEFAM_ID | TF315773 | |||||||
TrEMBL | UniProtAcc | O17345 | |||||||
UniProt_GCRP | UniProtAcc | O17345 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-6 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ttr | ||||||||
Allele (13) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00029646 | ||||||||
00029647 | |||||||||
00125408 | |||||||||
Ortholog (25) | |||||||||
Paralog (62) | |||||||||
Structured_description | Automated_description | Located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T28B4.3 | |||||||
Corresponding_transcript | T28B4.3.1 | ||||||||
Other_sequence (99) | |||||||||
Associated_feature | WBsf654071 | ||||||||
WBsf237497 | |||||||||
Experimental_info | RNAi_result | WBRNAi00054380 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00081190 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036069 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019381 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00081194 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr9506 | ||||||||
Expr1016353 | |||||||||
Expr1039100 | |||||||||
Expr1157928 | |||||||||
Expr2017625 | |||||||||
Expr2035765 | |||||||||
Drives_construct | WBCnstr00024811 | ||||||||
Construct_product | WBCnstr00014071 | ||||||||
WBCnstr00024811 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (224) | |||||||||
Interaction (28) | |||||||||
Map_info | Map | X | Position | -2.751 | |||||
Positive | Positive_clone | T28B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00034662 | ||||||||
WBPaper00038444 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |