WormBase Tree Display for Gene: WBGene00018978
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| WBGene00018978 | SMap | S_parent | Sequence | F56F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | ttr-58 | Person_evidence | WBPerson3786 | |||||
| WBPerson261 | |||||||||
| Sequence_name | F56F4.1 | ||||||||
| Molecular_name | F56F4.1 | ||||||||
| F56F4.1.1 | |||||||||
| CE48230 | |||||||||
| Other_name | sdz-22 | Paper_evidence | WBPaper00024645 | ||||||
| Person_evidence | WBPerson374 | ||||||||
| CELE_F56F4.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | ttr-58 | ||||||||
| DB_info | Database | AceView | gene | 1G727 | |||||
| WormQTL | gene | WBGene00018978 | |||||||
| WormFlux | gene | WBGene00018978 | |||||||
| NDB | locus_tag | CELE_F56F4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018978|UniProtKB=A7DT35 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 172299 | |||||||
| RefSeq | protein | NM_001026335.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | A7DT35 | |||||||
| UniProt_GCRP | UniProtAcc | A7DT35 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Aug 2005 17:08:06 | WBPerson2970 | Name_change | CGC_name | sdz-22 | ||||
| 3 | 20 Jul 2007 13:47:10 | WBPerson1867 | Event | Split_into | WBGene00045498 | ||||
| 4 | 03 Aug 2010 09:47:18 | WBPerson2970 | Name_change | CGC_name | ttr-58 | ||||
| Other_name | sdz-22 | ||||||||
| Split_into | WBGene00045498 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005045 | ||||||||
| 00123937 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56F4.1 | |||||||
| Corresponding_CDS_history | F56F4.1:wp147 | ||||||||
| F56F4.1:wp179 | |||||||||
| F56F4.1:wp237 | |||||||||
| F56F4.1a:wp121 | |||||||||
| F56F4.1b:wp121 | |||||||||
| Corresponding_transcript | F56F4.1.1 | ||||||||
| Other_sequence | CR08911 | ||||||||
| CRC01296_1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048753 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1015500 | ||||||||
| Expr1152499 | |||||||||
| Expr2035762 | |||||||||
| Microarray_results | GPL14144_F56F4.1_91-150_0.919_4_A | ||||||||
| GPL19516_CGZ0024765 | |||||||||
| GPL21109_F56F4.1 | |||||||||
| Expression_cluster (52) | |||||||||
| Interaction (251) | |||||||||
| Map_info | Map | I | Position | 0.818747 | Error | 0.006841 | |||
| Positive | Positive_clone | F56F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5447 | |||||||
| 4394 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038341 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
