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WormBase Tree Display for Gene: WBGene00012382

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Name Class

WBGene00012382SMapS_parentSequenceY5F2A
IdentityVersion2
NameCGC_namettr-16
Sequence_nameY5F2A.1
Molecular_nameY5F2A.1
Y5F2A.1.1
CE19022
Other_nameCELE_Y5F2A.1Accession_evidenceNDBBX284604
Public_namettr-16
DB_infoDatabaseAceViewgene4L828
WormQTLgeneWBGene00012382
WormFluxgeneWBGene00012382
NDBlocus_tagCELE_Y5F2A.1
PanthergeneCAEEL|WormBase=WBGene00012382|UniProtKB=P55955
familyPTHR21700
NCBIgene178002
RefSeqproteinNM_001383201.2
SwissProtUniProtAccP55955
TREEFAMTREEFAM_IDTF315773
UniProt_GCRPUniProtAccP55955
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 Sep 2007 11:48:01WBPerson2970Name_changeCGC_namettr-16
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttr
Allele (12)
RNASeq_FPKM (74)
GO_annotation (3)
Ortholog (26)
ParalogWBGene00003742Caenorhabditis elegansFrom_analysisPanther
WBGene00007142Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007304Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007535Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007590Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007888Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00008040Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008341Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008628Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008719Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009758Caenorhabditis elegansFrom_analysisPanther
WBGene00009759Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00010225Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010234Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010440Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010538Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010539Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010541Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011284Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011285Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011286Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011450Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011460Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011561Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011571Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011773Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011774Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011894Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018978Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00020886Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012383Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022515Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017688Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017667Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020047Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020049Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020566Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020335Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020339Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044605Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044788Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017374Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013078Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012849Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00017600Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00018085Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018979Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00050896Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00019203Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044737Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00023485Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013077Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00235391Caenorhabditis elegansFrom_analysisPanther
WBGene00013079Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017091Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045455Caenorhabditis elegansFrom_analysisPanther
WBGene00044663Caenorhabditis elegansFrom_analysisPanther
WBGene00017839Caenorhabditis elegansFrom_analysisPanther
WBGene00016164Caenorhabditis elegansFrom_analysisPanther
WBGene00045245Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016505Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00050892Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to be located in cell surface and extracellular region.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY5F2A.1
Corresponding_transcriptY5F2A.1.1
Other_sequence (66)
Associated_featureWBsf652180
WBsf652181
WBsf668288
WBsf230810
WBsf230811
WBsf230812
Experimental_infoRNAi_resultWBRNAi00021182Inferred_automaticallyRNAi_primary
WBRNAi00057789Inferred_automaticallyRNAi_primary
WBRNAi00037642Inferred_automaticallyRNAi_primary
WBRNAi00001663Inferred_automaticallyRNAi_primary
Expr_patternExpr1013713
Expr1035485
Expr1161219
Expr2017580
Expr2035720
Microarray_results (18)
Expression_cluster (175)
Interaction (86)
Map_infoMapIVPosition4.82258
PositivePositive_cloneY5F2AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00033099
WBPaper00063976
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene