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WormBase Tree Display for Gene: WBGene00011285

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Name Class

WBGene00011285SMapS_parentSequenceR90
IdentityVersion2
NameCGC_namettr-28
Sequence_nameR90.3
Molecular_nameR90.3
R90.3.1
CE48111
Other_nameCELE_R90.3Accession_evidenceNDBBX284605
Public_namettr-28
DB_infoDatabaseAceViewgene5N386
WormQTLgeneWBGene00011285
WormFluxgeneWBGene00011285
NDBlocus_tagCELE_R90.3
PanthergeneCAEEL|WormBase=WBGene00011285|UniProtKB=Q22035
familyPTHR21700
NCBIgene187889
RefSeqproteinNM_073825.4
TREEFAMTREEFAM_IDTF315773
TrEMBLUniProtAccQ22035
UniProt_GCRPUniProtAccQ22035
SpeciesCaenorhabditis elegans
HistoryVersion_change (2)
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttr
Allele (16)
RNASeq_FPKM (74)
GO_annotation00073838
00118546
Contained_in_operonCEOP5501
Ortholog (19)
ParalogWBGene00003742Caenorhabditis elegansFrom_analysisPanther
WBGene00007142Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007304Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007535Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007590Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007888Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00008040Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008341Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008628Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008719Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009758Caenorhabditis elegansFrom_analysisPanther
WBGene00009759Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00010225Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010234Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010440Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010538Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010539Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010541Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011284Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018978Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00020886Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012383Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022515Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017688Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011460Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017667Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012382Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013077Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013078Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020049Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013079Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017839Caenorhabditis elegansFrom_analysisPanther
WBGene00020047Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044737Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020335Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011561Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020566Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00045245Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020339Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044605Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044788Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017374Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018085Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011773Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011774Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018979Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00050896Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00050892Caenorhabditis elegansFrom_analysisPanther
WBGene00011286Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00011894Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012849Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00017600Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00011450Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019203Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00023485Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00235391Caenorhabditis elegansFrom_analysisPanther
WBGene00017091Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045455Caenorhabditis elegansFrom_analysisPanther
WBGene00044663Caenorhabditis elegansFrom_analysisPanther
WBGene00016164Caenorhabditis elegansFrom_analysisPanther
WBGene00011571Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016505Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in cell surface and extracellular region.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR90.3
Corresponding_CDS_historyR90.3:wp235
Corresponding_transcriptR90.3.1
Other_sequenceTcir_isotig16547
BXC04349_1
Tcol_isotig01289
MHC08474_1
Oden_isotig24020
MH01349
NB07485
Tcol_isotig10411
Tcol_isotig01288
Associated_featureWBsf234740
Experimental_infoRNAi_result (3)
Expr_patternExpr1017771
Expr1155692
Expr2017593
Expr2035732
Drives_constructWBCnstr00030777
Construct_productWBCnstr00030777
Microarray_results (18)
Expression_cluster (101)
InteractionWBInteraction000240986
WBInteraction000311198
WBInteraction000353634
WBInteraction000405642
WBInteraction000444283
Map_infoMapVPosition4.72464Error0.00046
PositivePositive_cloneR90Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene