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WormBase Tree Display for Gene: WBGene00020886

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Name Class

WBGene00020886SMapS_parentSequenceT28B4
IdentityVersion2
NameCGC_namettr-6
Sequence_nameT28B4.3
Molecular_nameT28B4.3
T28B4.3.1
CE14325
Other_nameCELE_T28B4.3Accession_evidenceNDBBX284606
Public_namettr-6
DB_infoDatabaseAceViewgeneXH214
WormQTLgeneWBGene00020886
WormFluxgeneWBGene00020886
NDBlocus_tagCELE_T28B4.3
PanthergeneCAEEL|WormBase=WBGene00020886|UniProtKB=O17345
familyPTHR21700
NCBIgene189028
RefSeqproteinNM_076709.6
TREEFAMTREEFAM_IDTF315773
TrEMBLUniProtAccO17345
UniProt_GCRPUniProtAccO17345
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
220 Sep 2007 11:48:01WBPerson2970Name_changeCGC_namettr-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttr
AlleleWBVar01498964
WBVar00034161
WBVar00506508
WBVar01155330
WBVar01155331
WBVar01155332
WBVar01155333
WBVar01155334
WBVar01498523
WBVar01881600
WBVar01881601
WBVar01881602
WBVar01500067
RNASeq_FPKM (74)
GO_annotation00029646
00029647
00125408
Ortholog (25)
ParalogWBGene00003742Caenorhabditis elegansFrom_analysisPanther
WBGene00007142Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007304Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007535Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007590Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007888Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00008040Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008341Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008628Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008719Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009758Caenorhabditis elegansFrom_analysisPanther
WBGene00009759Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00010225Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010234Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010440Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010538Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010539Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010541Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011284Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011285Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011286Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011450Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011460Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011561Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011571Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011773Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011774Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011894Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012382Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012383Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012849Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00013077Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013078Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013079Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016164Caenorhabditis elegansFrom_analysisPanther
WBGene00016505Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017091Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017374Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017600Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00017667Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017688Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017839Caenorhabditis elegansFrom_analysisPanther
WBGene00018085Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018978Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00018979Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00019203Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020047Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020049Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020335Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020339Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020566Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044788Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00050896Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00044605Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044737Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00023485Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00235391Caenorhabditis elegansFrom_analysisPanther
WBGene00045455Caenorhabditis elegansFrom_analysisPanther
WBGene00044663Caenorhabditis elegansFrom_analysisPanther
WBGene00045245Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022515Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00050892Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionLocated in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST28B4.3
Corresponding_transcriptT28B4.3.1
Other_sequence (99)
Associated_featureWBsf654071
WBsf237497
Experimental_infoRNAi_resultWBRNAi00054380Inferred_automaticallyRNAi_primary
WBRNAi00081190Inferred_automaticallyRNAi_primary
WBRNAi00036069Inferred_automaticallyRNAi_primary
WBRNAi00019381Inferred_automaticallyRNAi_primary
WBRNAi00081194Inferred_automaticallyRNAi_primary
Expr_patternExpr9506
Expr1016353
Expr1039100
Expr1157928
Expr2017625
Expr2035765
Drives_constructWBCnstr00024811
Construct_productWBCnstr00014071
WBCnstr00024811
Microarray_results (19)
Expression_cluster (224)
InteractionWBInteraction000182593
WBInteraction000204123
WBInteraction000204875
WBInteraction000204907
WBInteraction000206047
WBInteraction000224478
WBInteraction000240064
WBInteraction000254626
WBInteraction000255356
WBInteraction000260195
WBInteraction000287049
WBInteraction000299967
WBInteraction000304059
WBInteraction000324342
WBInteraction000329654
WBInteraction000343716
WBInteraction000361973
WBInteraction000364413
WBInteraction000364437
WBInteraction000375705
WBInteraction000382074
WBInteraction000390903
WBInteraction000394161
WBInteraction000394484
WBInteraction000417340
WBInteraction000424560
WBInteraction000444262
WBInteraction000449226
Map_infoMapXPosition-2.751
PositivePositive_cloneT28B4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00034662
WBPaper00038444
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene