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WormBase Tree Display for Gene: WBGene00020307

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Name Class

WBGene00020307SMapS_parentSequenceT07D3
IdentityVersion1
NameSequence_nameT07D3.4
Molecular_nameT07D3.4a
T07D3.4a.1
CE13361
T07D3.4b
CE51164
T07D3.4b.1
Other_nameCELE_T07D3.4Accession_evidenceNDBBX284602
Public_nameT07D3.4
DB_infoDatabaseAceViewgene2B179
WormQTLgeneWBGene00020307
WormFluxgeneWBGene00020307
OMIMdisease253800
611588
611615
613152
gene607440
NDBlocus_tagCELE_T07D3.4
PanthergeneCAEEL|WormBase=WBGene00020307|UniProtKB=O16723
familyPTHR15407
NCBIgene173469
RefSeqproteinNM_061439.7
NM_001318301.3
TrEMBLUniProtAccO16723
A0A0S4XRC0
UniProt_GCRPUniProtAccO16723
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00012871
WBVar01499702
WBVar00012876
WBVar02119865
WBVar00012881
WBVar00012886
WBVar00012891
WBVar02121531
WBVar00012896
WBVar02122085
WBVar00012901
WBVar00012906
WBVar01682477
WBVar00012911
WBVar01682478
WBVar01715701
WBVar01682479
WBVar01682480
WBVar00012916
WBVar00355833
WBVar01500106
WBVar02124869
WBVar00355834
WBVar00355835
WBVar02017288
WBVar02124319
WBVar00355836
WBVar00355837
WBVar00355838
WBVar02116776
WBVar00355839
WBVar02116777
WBVar00355840
WBVar00355841
WBVar00355842
WBVar00355843
WBVar00355844
WBVar01532982
WBVar00355845
WBVar01532983
WBVar00355846
WBVar01532984
WBVar01532985
WBVar02066930
WBVar02066931
WBVar01532986
WBVar01532987
WBVar01532988
WBVar01532989
WBVar01532990
WBVar01532991
WBVar01532992
WBVar01532993
WBVar01532994
WBVar01532995
WBVar01532996
WBVar01532997
WBVar01623664
WBVar01532998
WBVar01532999
WBVar01623665
WBVar01533000
WBVar01623666
WBVar01623667
WBVar01533001
WBVar01623668
WBVar01533002
WBVar01623669
WBVar02086071
WBVar01623670
WBVar01623671
WBVar01788792
WBVar01623672
WBVar02093619
WBVar01623673
WBVar02093620
WBVar01623674
WBVar01623675
WBVar02093621
WBVar01623676
WBVar02093622
WBVar01623677
WBVar02093623
WBVar01623678
WBVar02093624
WBVar01623679
WBVar02093625
WBVar01623680
WBVar02093626
WBVar01623681
WBVar01988719
WBVar01988720
WBVar01623682
WBVar01623683
WBVar01293064
WBVar01623684
WBVar01293066
WBVar01623685
WBVar01623686
WBVar01623687
WBVar01623688
WBVar01623689
WBVar01623690
WBVar01623691
WBVar01623692
WBVar01623693
WBVar01623694
WBVar01623695
WBVar01623696
WBVar01623697
WBVar01623698
WBVar01623699
WBVar01623700
WBVar01623701
WBVar01623702
WBVar01623703
WBVar01623704
WBVar01623705
WBVar01623706
WBVar01623707
WBVar00095960
WBVar01623708
WBVar00095961
WBVar01910402
WBVar01910403
WBVar00701786
WBVar00701787
WBVar01891330
WBVar01891331
WBVar00701788
WBVar01891332
WBVar00701789
WBVar01891333
WBVar00701790
WBVar00701791
WBVar01891334
WBVar01891335
WBVar00701792
WBVar00701793
WBVar01891336
WBVar00701794
WBVar00701795
WBVar00701796
WBVar00701797
WBVar00701798
WBVar00701799
WBVar00701800
WBVar00701801
WBVar00701802
WBVar00701803
WBVar00701804
WBVar00701805
WBVar02121120
WBVar00701806
WBVar00701807
WBVar00701808
WBVar00701809
WBVar01933148
WBVar01933149
WBVar01933150
WBVar00091948
WBVar00091049
WBVar02075061
WBVar02075062
WBVar02120591
WBVar02083973
WBVar00012866
StrainWBStrain00031550
RNASeq_FPKM (74)
GO_annotation00001837
Ortholog (57)
ParalogWBGene00011554Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00017877Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00020924Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021249Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020309Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00020308Caenorhabditis elegansFrom_analysisTreeFam
WBGene00020927Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045475Caenorhabditis elegansFrom_analysisPanther
Structured_description (2)
Disease_infoPotential_modelDOID:0050560Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0050559Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110443Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:9884Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0112379Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110296Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110444Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110284Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
Disease_relevanceThe human ortholog of elegans TO7D3.4, Fukutin, is required for normal glycosylation of the cell surface laminin receptor, alpha-dystroglycan; mutations in Fukutin cause cardiomyopathy and Fukuyama-type congenital muscular dystrophy (FCMD), an inherited condition that predominantly affects the muscles, brain, and eyes, due to weakness and wasting of skeletal muscles.Homo sapiensAccession_evidenceOMIM611615
253800
613152
611588
607440
Curator_confirmedWBPerson324
Date_last_updated11 Jun 2012 00:00:00
Molecular_infoCorresponding_CDST07D3.4a
T07D3.4b
Corresponding_transcriptT07D3.4a.1
T07D3.4b.1
Other_sequenceOden_isotig15156
Oden_isotig21890
Dviv_isotig31365
Associated_featureWBsf643929
WBsf643930
WBsf986513
WBsf986514
WBsf986515
WBsf1011453
WBsf1011454
WBsf220796
Experimental_infoRNAi_resultWBRNAi00035302Inferred_automaticallyRNAi_primary
WBRNAi00052752Inferred_automaticallyRNAi_primary
WBRNAi00018361Inferred_automaticallyRNAi_primary
WBRNAi00115898Inferred_automaticallyRNAi_primary
Expr_patternExpr1013786
Expr1038847
Expr1156361
Expr2005965
Expr2024181
Drives_constructWBCnstr00025231
Construct_productWBCnstr00025231
Microarray_results (15)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00035211:age-1_vs_age-1_downregulated
WBPaper00035211:age-1_vs_N2_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:AVE-neuron_embryo_enriched
WBPaper00037950:intestine_CoreEnriched
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00038104:DATS_downregulated
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045571:germline-ablation_upregulated
WBPaper00046024:sleep_downregulated_oscillating
WBPaper00046121:endoderm_unique
WBPaper00048923:Aging_regulated
WBPaper00048926:miaserin_upregulated_adult-day5
WBPaper00048988:neuron_expressed
WBPaper00049217:TCER-1_downregulated
WBPaper00049334:CE_intestine_enriched
WBPaper00049368:daf-2(e1370)_upregulated
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
WBPaper00050332:skn-1(RNAi)_downregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053909:N2_vs_CB4856_upregulated
WBPaper00054872:egl-9(sa307)_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056284:ints-4(RNAi)_downregulated
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056619:CEPsh_enriched
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057158:mdt-15(tm2182)_dependent_15C_downregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058678:DAF-12_upregulated_PVD
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00059253:sucrose_downregulated
WBPaper00059253:sucrose_stearic-acid_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060278:atp-2(RNAi)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060661:sensory-neuron_depleted
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:Intestine
WBPaper00061527:C24A3.4_16071-ech-8
WBPaper00061651:Rectal_gland_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064532:pals-25(icb98)_downregulated
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065199:Transgeneration-starvation_regulated_fed
WBPaper00065315:mating_downregulated_Day2-7
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065841:3_4
WBPaper00065841:3_5
WBPaper00065841:30_0
WBPaper00065841:30_3
WBPaper00065841:30_4
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066204:CdCl2_upregulated_mRNA
WBPaper00025032:cluster_16
WBPaper00026980:intestine_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00034739:N2moreDR1350
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035227:heat_shock_regulated
WBPaper00037695:CC_3-day
WBPaper00037695:LD_3-day
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00040985:AIN-2_L4_intestine
WBPaper00041002:HQ_3d_2.0mM_Down
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-exposed_3h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041960:daf-16_fasting_upregulated
WBPaper00041960:jun-1_fasting_upregulated
WBPaper00041960:kgb-1_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00044535:male_downregulated
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00056330:mrps-5(RNAi)_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
InteractionWBInteraction000389723
WBInteraction000446865
Map_infoPositivePositive_cloneT07D3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-15.5897
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00062840
MethodGene