WormBase Tree Display for Expression_cluster: WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
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| WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray | Description | Genes with increased expression after 24 hours of infection by S.marcescens Fold changes shown are pathogen vs OP50. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | For RNA-seq and tiling arrays, log2 fold changes between gene expression values of infected versus uninfected nematodes were calculated. For log2 fold changes > 0.00001 the values > 81.25th percentile were defined as up-regulated and for log2 fold changes < -0.00001 the values < 18.75th percentile were defined as down-regulated. | ||
| Reference | WBPaper00038438 | ||
| Based_on_WB_Release | 210 | ||
| Gene (2618) | |||
| Attribute_of | Tiling_array | ||
| Regulation | Regulated_by_treatment | Bacteria infection: Serratia marcescens | |
| Associated_with | Life_stage | WBls:0000041 | |
| WBProcess | WBbiopr:00000008 | ||
| WBbiopr:00000039 | |||
| Remark | Type: Bacteria Infection |
