WormBase Tree Display for Gene: WBGene00021249
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| WBGene00021249 | SMap | S_parent | Sequence | Y22D7AL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y22D7AL.11 | |||||||
| Molecular_name | Y22D7AL.11a | ||||||||
| Y22D7AL.11a.1 | |||||||||
| CE54073 | |||||||||
| Y22D7AL.11b | |||||||||
| Y22D7AL.11b.1 | |||||||||
| Other_name | CELE_Y22D7AL.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y22D7AL.11 | ||||||||
| DB_info | Database | AceView | gene | 3C718 | |||||
| WormQTL | gene | WBGene00021249 | |||||||
| WormFlux | gene | WBGene00021249 | |||||||
| NDB | locus_tag | CELE_Y22D7AL.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021249|UniProtKB=Q965P8 | |||||||
| family | PTHR15407 | ||||||||
| NCBI | gene | 189504 | |||||||
| RefSeq | protein | NM_001381739.1 | |||||||
| NM_001381741.1 | |||||||||
| TrEMBL | UniProtAcc | A0A679L8Q3 | |||||||
| UniProt_GCRP | UniProtAcc | A0A679L8Q3 | |||||||
| OMIM | gene | 607440 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (121) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004202 | ||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00011554 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017877 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00020307 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020308 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00020309 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00020924 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020927 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00045475 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to be involved in protein glycosylation. Human ortholog(s) of this gene implicated in Fukuyama congenital muscular dystrophy; Walker-Warburg syndrome; autosomal recessive limb-girdle muscular dystrophy type 2L; autosomal recessive limb-girdle muscular dystrophy type 2M; dilated cardiomyopathy (multiple); and muscular dystrophy-dystroglycanopathy type B4. Is an ortholog of human FKTN (fukutin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050560 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
| DOID:0050559 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110443 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:9884 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0112379 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110296 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110444 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110284 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| Molecular_info | Corresponding_CDS | Y22D7AL.11a | |||||||
| Y22D7AL.11b | |||||||||
| Corresponding_CDS_history | Y22D7AL.11:wp147 | ||||||||
| Y22D7AL.11:wp275 | |||||||||
| Corresponding_transcript | Y22D7AL.11a.1 | ||||||||
| Y22D7AL.11b.1 | |||||||||
| Other_sequence | JI479469.1 | ||||||||
| Dviv_isotig25542 | |||||||||
| MJ00235 | |||||||||
| Dviv_isotig16806 | |||||||||
| JI464606.1 | |||||||||
| BMC18193_1 | |||||||||
| MH05170 | |||||||||
| HG12334 | |||||||||
| JI220448.1 | |||||||||
| Associated_feature | WBsf226233 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00055661 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1016519 | ||||||||
| Expr1159187 | |||||||||
| Expr2007149 | |||||||||
| Expr2025381 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (97) | |||||||||
| Map_info | Positive | Positive_clone | Y22D7AL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -20.0254 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062840 | |||||||||
| WBPaper00065080 | |||||||||
| Method | Gene |
