WormBase Tree Display for Gene: WBGene00020924
expand all nodes | collapse all nodes | view schema
| WBGene00020924 | SMap | S_parent | Sequence | W02B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W02B3.4 | |||||||
| Molecular_name | W02B3.4 | ||||||||
| W02B3.4.1 | |||||||||
| CE34600 | |||||||||
| Other_name | CELE_W02B3.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | W02B3.4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (87) | |||||||||
| Strain | WBStrain00003334 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00053424 | ||||||||
| 00053425 | |||||||||
| 00053426 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00011554 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017877 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00020307 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020308 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00020309 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00021249 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020927 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00045475 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to be involved in protein glycosylation. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Fukuyama congenital muscular dystrophy; Walker-Warburg syndrome; autosomal recessive limb-girdle muscular dystrophy type 2L; autosomal recessive limb-girdle muscular dystrophy type 2M; dilated cardiomyopathy (multiple); and muscular dystrophy-dystroglycanopathy type B4. Is an ortholog of human FKTN (fukutin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050560 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
| DOID:0050559 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110443 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:9884 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0112379 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110296 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110444 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110284 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| Molecular_info | Corresponding_CDS | W02B3.4 | |||||||
| Corresponding_CDS_history | W02B3.4:wp102 | ||||||||
| Corresponding_transcript | W02B3.4.1 | ||||||||
| Other_sequence | Acan_isotig16043 | ||||||||
| Associated_feature | WBsf226121 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00036177 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054567 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006634 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram182 | ||||||||
| Expr6820 | |||||||||
| Expr1022840 | |||||||||
| Expr1158113 | |||||||||
| Expr2006684 | |||||||||
| Expr2024901 | |||||||||
| Drives_construct | WBCnstr00003805 | ||||||||
| WBCnstr00024782 | |||||||||
| Construct_product | WBCnstr00024782 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (100) | |||||||||
| Map_info | Positive | Positive_clone | W02B3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -26.2854 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062840 | |||||||||
| WBPaper00065080 | |||||||||
| Method | Gene |
