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WormBase Tree Display for Gene: WBGene00020924

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Name Class

WBGene00020924SMapS_parentSequenceW02B3
IdentityVersion1
NameSequence_nameW02B3.4
Molecular_nameW02B3.4
W02B3.4.1
CE34600
Other_nameCELE_W02B3.4Accession_evidenceNDBBX284603
Public_nameW02B3.4
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (87)
StrainWBStrain00003334
RNASeq_FPKM (74)
GO_annotation00053424
00053425
00053426
Ortholog (36)
ParalogWBGene00011554Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00017877Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00020307Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020308Caenorhabditis elegansFrom_analysisTreeFam
WBGene00020309Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00021249Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020927Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045475Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to be involved in protein glycosylation. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Fukuyama congenital muscular dystrophy; Walker-Warburg syndrome; autosomal recessive limb-girdle muscular dystrophy type 2L; autosomal recessive limb-girdle muscular dystrophy type 2M; dilated cardiomyopathy (multiple); and muscular dystrophy-dystroglycanopathy type B4. Is an ortholog of human FKTN (fukutin).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050560Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0050559Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110443Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:9884Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0112379Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110296Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110444Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
DOID:0110284Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:3622)
Molecular_infoCorresponding_CDSW02B3.4
Corresponding_CDS_historyW02B3.4:wp102
Corresponding_transcriptW02B3.4.1
Other_sequenceAcan_isotig16043
Associated_featureWBsf226121
Experimental_infoRNAi_resultWBRNAi00036177Inferred_automaticallyRNAi_primary
WBRNAi00054567Inferred_automaticallyRNAi_primary
WBRNAi00006634Inferred_automaticallyRNAi_primary
Expr_patternChronogram182
Expr6820
Expr1022840
Expr1158113
Expr2006684
Expr2024901
Drives_constructWBCnstr00003805
WBCnstr00024782
Construct_productWBCnstr00024782
Microarray_results (19)
Expression_clusterWBPaper00029359_1217
WBPaper00029359_1280
WBPaper00029359_1444
WBPaper00029359_1504
WBPaper00029359_1548
WBPaper00029359_1604
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_embryo_enriched
WBPaper00037950:coelomocytes_embryo_SelectivelyEnriched
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
WBPaper00044316:CH3HgCl_7.5uM_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049635:dop-1(vs100)_downregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055941:atfs-1(et15)_downregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00056826:SGP_biased
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00057068:numr-1(RNAi)_upregulated_Cadmium
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00059598:HeatShock_downregulated
WBPaper00059987:Wounding_downregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060909:atfs-1(et18)_upregulated
WBPaper00060921:tdc-1(n3419)_downregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061340:Coelomocyte
WBPaper00061340:GLR
WBPaper00061340:hmc_and_homolog
WBPaper00061340:hmc_homolog
WBPaper00061341:28C_48h_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:srj-21-srh-32
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064716:paraquat_downregulated
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065074:glna(-)_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065841:0_0
WBPaper00065841:1_2
WBPaper00065841:12_0
WBPaper00065841:23_0
WBPaper00065841:137_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_I
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00045015:nhr-25(RNAi)_downregulated
WBPaper00055899:nitroguanidine_regulated
Map_infoPositivePositive_cloneW02B3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-26.2854
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00062840
WBPaper00065080
MethodGene