WormBase Tree Display for Gene: WBGene00011554
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WBGene00011554 | SMap | S_parent | Sequence | T07A5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | T07A5.1 | |||||||
Molecular_name | T07A5.1 | ||||||||
T07A5.1.1 | |||||||||
CE41335 | |||||||||
Other_name | CELE_T07A5.1 | Accession_evidence | NDB | BX284603 | |||||
Public_name | T07A5.1 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 20 Jun 2007 16:25:29 | WBPerson1983 | Event | Split_into | WBGene00045475 | ||||
Split_into | WBGene00045475 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (45) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00056025 | ||||||||
00056026 | |||||||||
00056027 | |||||||||
00056028 | |||||||||
Ortholog (42) | |||||||||
Paralog | WBGene00020307 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020924 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020309 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WBGene00017877 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WBGene00021249 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020308 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00020927 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00045475 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Predicted to be involved in protein glycosylation. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Fukuyama congenital muscular dystrophy; Walker-Warburg syndrome; autosomal recessive limb-girdle muscular dystrophy type 2L; autosomal recessive limb-girdle muscular dystrophy type 2M; dilated cardiomyopathy (multiple); and muscular dystrophy-dystroglycanopathy type B4. Is an ortholog of human FKTN (fukutin). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0050560 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
DOID:0050559 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
DOID:0110443 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
DOID:9884 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
DOID:0112379 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
DOID:0110296 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
DOID:0110444 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
DOID:0110284 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
Molecular_info | Corresponding_CDS | T07A5.1 | |||||||
Corresponding_CDS_history | T07A5.1:wp178 | ||||||||
Corresponding_transcript | T07A5.1.1 | ||||||||
Other_sequence | Dviv_isotig16807 | ||||||||
CRC01648_1 | |||||||||
CR04677 | |||||||||
Associated_feature | WBsf227434 | ||||||||
Experimental_info | RNAi_result | WBRNAi00006386 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052693 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020077 | ||||||||
Expr1156299 | |||||||||
Expr2005948 | |||||||||
Expr2024165 | |||||||||
Drives_construct | WBCnstr00030565 | ||||||||
Construct_product | WBCnstr00030565 | ||||||||
Microarray_results (12) | |||||||||
Expression_cluster (161) | |||||||||
Map_info | Positive | Positive_clone | T07A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 2.29338 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00062840 | |||||||||
WBPaper00065080 | |||||||||
Method | Gene |