WormBase Tree Display for Gene: WBGene00011554
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| WBGene00011554 | SMap | S_parent | Sequence | T07A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | T07A5.1 | |||||||
| Molecular_name | T07A5.1 | ||||||||
| T07A5.1.1 | |||||||||
| CE41335 | |||||||||
| Other_name | CELE_T07A5.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | T07A5.1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Jun 2007 16:25:29 | WBPerson1983 | Event | Split_into | WBGene00045475 | ||||
| Split_into | WBGene00045475 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01500260 | ||||||||
| WBVar02141093 | |||||||||
| WBVar00178496 | |||||||||
| WBVar01507472 | |||||||||
| WBVar00178497 | |||||||||
| WBVar00178498 | |||||||||
| WBVar02069710 | |||||||||
| WBVar02132627 | |||||||||
| WBVar00855676 | |||||||||
| WBVar00855677 | |||||||||
| WBVar00855678 | |||||||||
| WBVar00855679 | |||||||||
| WBVar00855680 | |||||||||
| WBVar00855681 | |||||||||
| WBVar00855682 | |||||||||
| WBVar00855683 | |||||||||
| WBVar00855684 | |||||||||
| WBVar00855685 | |||||||||
| WBVar00855686 | |||||||||
| WBVar01542240 | |||||||||
| WBVar00855687 | |||||||||
| WBVar00855688 | |||||||||
| WBVar00855689 | |||||||||
| WBVar00855690 | |||||||||
| WBVar00855691 | |||||||||
| WBVar00855692 | |||||||||
| WBVar00855693 | |||||||||
| WBVar00855694 | |||||||||
| WBVar01499774 | |||||||||
| WBVar02141169 | |||||||||
| WBVar01409232 | |||||||||
| WBVar01447988 | |||||||||
| WBVar00234051 | |||||||||
| WBVar01904132 | |||||||||
| WBVar00407079 | |||||||||
| WBVar00407080 | |||||||||
| WBVar00407081 | |||||||||
| WBVar00407082 | |||||||||
| WBVar00407083 | |||||||||
| WBVar01474438 | |||||||||
| WBVar00564969 | |||||||||
| WBVar00564970 | |||||||||
| WBVar00564972 | |||||||||
| WBVar00564973 | |||||||||
| WBVar01397230 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00056025 | ||||||||
| 00056026 | |||||||||
| 00056027 | |||||||||
| 00056028 | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00020307 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020924 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020309 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00017877 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00021249 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020308 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00020927 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00045475 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to be involved in protein glycosylation. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Fukuyama congenital muscular dystrophy; Walker-Warburg syndrome; autosomal recessive limb-girdle muscular dystrophy type 2L; autosomal recessive limb-girdle muscular dystrophy type 2M; dilated cardiomyopathy (multiple); and muscular dystrophy-dystroglycanopathy type B4. Is an ortholog of human FKTN (fukutin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050560 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
| DOID:0050559 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110443 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:9884 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0112379 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110296 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110444 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| DOID:0110284 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||||
| Molecular_info | Corresponding_CDS | T07A5.1 | |||||||
| Corresponding_CDS_history | T07A5.1:wp178 | ||||||||
| Corresponding_transcript | T07A5.1.1 | ||||||||
| Other_sequence | Dviv_isotig16807 | ||||||||
| CRC01648_1 | |||||||||
| CR04677 | |||||||||
| Associated_feature | WBsf227434 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00006386 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052693 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020077 | ||||||||
| Expr1156299 | |||||||||
| Expr2005948 | |||||||||
| Expr2024165 | |||||||||
| Drives_construct | WBCnstr00030565 | ||||||||
| Construct_product | WBCnstr00030565 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (161) | |||||||||
| Map_info | Positive | Positive_clone | T07A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 2.29338 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062840 | |||||||||
| WBPaper00065080 | |||||||||
| Method | Gene |
