WormBase Tree Display for Gene: WBGene00020308
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| WBGene00020308 | SMap | S_parent | Sequence | T07D3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | T07D3.5 | ||||||||
| Molecular_name | T07D3.5 | |||||||||
| Other_name | CELE_T07D3.5 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | T07D3.5 | |||||||||
| DB_info | Database | AceView | gene | 2B171 | ||||||
| WormQTL | gene | WBGene00020308 | ||||||||
| WormFlux | gene | WBGene00020308 | ||||||||
| NDB | locus_tag | CELE_T07D3.5 | ||||||||
| NCBI | gene | 188223 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 30 Oct 2015 16:51:45 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (53) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (12) | ||||||||||
| Paralog | WBGene00011554 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00017877 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00020307 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00020924 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00020309 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00021249 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Structured_description | Automated_description | Enriched in CEPshDL; CEPshDR; CEPshVL; CEPshVR; and body wall muscle cell based on tiling array and RNA-seq studies. Is affected by several genes including eat-2; elt-2; and dpy-7 based on tiling array; RNA-seq; and microarray studies. Is affected by stavudine; Rifampin; and adsorbable organic bromine compound based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T07D3.5:wp251 | ||||||||
| Corresponding_pseudogene | T07D3.5 | |||||||||
| Associated_feature | WBsf717625 | |||||||||
| WBsf1011452 | ||||||||||
| Experimental_info | Expr_pattern | Expr1018613 | ||||||||
| Expr1156362 | ||||||||||
| Microarray_results | SMD_T07D3.5 | |||||||||
| 179941_at | ||||||||||
| Aff_T07D3.5 | ||||||||||
| GPL19516_CGZ0033958 | ||||||||||
| GPL21109_T07D3.5 | ||||||||||
| GPL8673_T07D3_5P00290 | ||||||||||
| Expression_cluster (25) | ||||||||||
| Interaction | WBInteraction000386336 | |||||||||
| WBInteraction000433040 | ||||||||||
| WBInteraction000451501 | ||||||||||
| Map_info | Positive | Positive_clone | T07D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | II | -15.5898 | ||||||||
| Reference | WBPaper00038491 | |||||||||
| WBPaper00065080 | ||||||||||
| Method | Gene |
