WormBase Tree Display for Gene: WBGene00011554
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WBGene00011554 | SMap | S_parent | Sequence | T07A5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | T07A5.1 | |||||
Molecular_name | T07A5.1 | ||||||
T07A5.1.1 | |||||||
CE41335 | |||||||
Other_name | CELE_T07A5.1 | Accession_evidence | NDB | BX284603 | |||
Public_name | T07A5.1 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Split_into | WBGene00045475 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (45) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00056025 | ||||||
00056026 | |||||||
00056027 | |||||||
00056028 | |||||||
Ortholog (42) | |||||||
Paralog | WBGene00020307 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00020924 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00020309 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
WBGene00017877 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
WBGene00021249 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00020308 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00020927 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00045475 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Automated_description | Predicted to be involved in protein glycosylation. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Fukuyama congenital muscular dystrophy; Walker-Warburg syndrome; autosomal recessive limb-girdle muscular dystrophy type 2L; autosomal recessive limb-girdle muscular dystrophy type 2M; dilated cardiomyopathy (multiple); and muscular dystrophy-dystroglycanopathy type B4. Is an ortholog of human FKTN (fukutin). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0050560 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||
DOID:0050559 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
DOID:0110443 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
DOID:9884 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
DOID:0112379 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
DOID:0110296 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
DOID:0110444 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
DOID:0110284 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | ||||
Molecular_info | Corresponding_CDS | T07A5.1 | |||||
Corresponding_CDS_history | T07A5.1:wp178 | ||||||
Corresponding_transcript | T07A5.1.1 | ||||||
Other_sequence | Dviv_isotig16807 | ||||||
CRC01648_1 | |||||||
CR04677 | |||||||
Associated_feature | WBsf227434 | ||||||
Experimental_info | RNAi_result | WBRNAi00006386 | Inferred_automatically | RNAi_primary | |||
WBRNAi00052693 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1020077 | ||||||
Expr1156299 | |||||||
Expr2005948 | |||||||
Expr2024165 | |||||||
Drives_construct | WBCnstr00030565 | ||||||
Construct_product | WBCnstr00030565 | ||||||
Microarray_results (12) | |||||||
Expression_cluster (161) | |||||||
Map_info | Positive | Positive_clone | T07A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | III | 2.29338 | |||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00062840 | |||||||
WBPaper00065080 | |||||||
Method | Gene |