WormBase Tree Display for Gene: WBGene00011554
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WBGene00011554 | SMap | S_parent | Sequence | T07A5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (45) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00056025 | |||||
00056026 | ||||||
00056027 | ||||||
00056028 | ||||||
Ortholog (42) | ||||||
Paralog | WBGene00020307 | Caenorhabditis elegans | From_analysis | TreeFam | ||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00020924 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00020309 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
WBGene00017877 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
WBGene00021249 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | ||||||
Panther | ||||||
WormBase-Compara | ||||||
WBGene00020308 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00020927 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00045475 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Automated_description | Predicted to be involved in protein glycosylation. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Fukuyama congenital muscular dystrophy; Walker-Warburg syndrome; autosomal recessive limb-girdle muscular dystrophy type 2L; autosomal recessive limb-girdle muscular dystrophy type 2M; dilated cardiomyopathy (multiple); and muscular dystrophy-dystroglycanopathy type B4. Is an ortholog of human FKTN (fukutin). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:0050560 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | |
DOID:0050559 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | |||
DOID:0110443 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | |||
DOID:9884 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | |||
DOID:0112379 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | |||
DOID:0110296 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | |||
DOID:0110444 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | |||
DOID:0110284 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3622) | |||
Molecular_info | Corresponding_CDS | T07A5.1 | ||||
Corresponding_CDS_history | T07A5.1:wp178 | |||||
Corresponding_transcript | T07A5.1.1 | |||||
Other_sequence | Dviv_isotig16807 | |||||
CRC01648_1 | ||||||
CR04677 | ||||||
Associated_feature | WBsf227434 | |||||
Experimental_info | RNAi_result | WBRNAi00006386 | Inferred_automatically | RNAi_primary | ||
WBRNAi00052693 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1020077 | |||||
Expr1156299 | ||||||
Expr2005948 | ||||||
Expr2024165 | ||||||
Drives_construct | WBCnstr00030565 | |||||
Construct_product | WBCnstr00030565 | |||||
Microarray_results (12) | ||||||
Expression_cluster (161) | ||||||
Map_info | Positive | Positive_clone | T07A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | III | 2.29338 | ||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
WBPaper00062840 | ||||||
WBPaper00065080 | ||||||
Method | Gene |