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WormBase Tree Display for Variation: WBVar00012901

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Name Class

WBVar00012901NamePublic_nameWBVar00012901
Other_namepas14177
cewivar00077742
T07D3.4a.1:c.1035+19G>A
T07D3.4b.1:c.480+19G>A
HGVSgCHROMOSOME_II:g.890463G>A
Sequence_detailsSMapS_parentSequenceT07D3
Flanking_sequencescccatcattgggtgggcggaattgccagtgagttactgtagggggtactgtacaagatactgtagggggtagggtacgatagaggtactgtggggtaactataaggttactgtacaagatcttgtgagggtactgtagacgtactgtaaatttcaattttgtcaaattccagccgacggcaccaaatacaagttcacctaccctatctacgatccttggtgtgcagcggatcttcacggtcatattttctgggtctcctgtaatccactggagaaaattttggtaacttttttcagggaatttttgattaatcttcgaatttccaggcagagtatggagaagactggaaaaaggatcacctctcatccgagtacagatggaattattcgcagaaaaatgtgcaaacaaacgggaaatatacagcggagcagatgaagatgctttatagaaaggctacaatcgggttccgtgctgtacacagagctttaaactcatttatttctaggattcctattttataaaatgaataaattttttggaagcagcggacattttacgggtctcagcaagcacttaaaaaatatcagagagcagcggacg
Mapping_targetT07D3
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00020307
TranscriptT07D3.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT07D3.4b.1:c.480+19G>A
Intron_number3/3
T07D3.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT07D3.4a.1:c.1035+19G>A
Intron_number9/10
MethodWGS_Pasadena_Quinlan