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WormBase Tree Display for Variation: WBVar01933149

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Name Class

WBVar01933149NamePublic_nameWBVar01933149
Other_namecewivar00652607
T07D3.4b.1:c.179_183del
T07D3.4a.1:c.734_738del
CE51164:p.Tyr60Ter
CE13361:p.Tyr245Ter
HGVSgCHROMOSOME_II:g.889951_889955del
Sequence_detailsSMapS_parentSequenceT07D3
Flanking_sequencesCGGTCTTTGCGAAGGATTATAACCCAATCTGAATTACTTCACAGCTACTGGAATCCGTCT
Mapping_targetT07D3
Source_location225CHROMOSOME_II889958889962From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00020307
TranscriptT07D3.4b.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScT07D3.4b.1:c.179_183del
HGVSpCE51164:p.Tyr60Ter
cDNA_position179-183
CDS_position179-183
Protein_position60-61
Exon_number1/4
Codon_changetACGTG/t
Amino_acid_changeYV/X
T07D3.4a.1VEP_consequenceframeshift_variant
VEP_impactHIGH
HGVScT07D3.4a.1:c.734_738del
HGVSpCE13361:p.Tyr245Ter
cDNA_position877-881
CDS_position734-738
Protein_position245-246
Exon_number7/11
Codon_changetACGTG/t
Amino_acid_changeYV/X
MethodWGS_Flibotte