WormBase Tree Display for Variation: WBVar01623690
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WBVar01623690 | Name | Public_name | WBVar01623690 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00303652 | |||||||
CE51164:p.Gly28= | ||||||||
CE13361:p.Gly213= | ||||||||
T07D3.4a.1:c.639C>T | ||||||||
T07D3.4b.1:c.84C>T | ||||||||
HGVSg | CHROMOSOME_II:g.889856C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | T07D3 | ||||
Flanking_sequences | CGAGTTTGACATGTACCCATTCCTTAACGG | GGAACATTTCTCGGCTGGTACCGTGAGTGC | ||||||
Mapping_target | T07D3 | |||||||
Source_location | 225 | CHROMOSOME_II | 889863 | 889863 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020307 | ||||||
Transcript | T07D3.4b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.4b.1:c.84C>T | |||||||
HGVSp | CE51164:p.Gly28= | |||||||
cDNA_position | 84 | |||||||
CDS_position | 84 | |||||||
Protein_position | 28 | |||||||
Exon_number | 1/4 | |||||||
Codon_change | ggC/ggT | |||||||
Amino_acid_change | G | |||||||
T07D3.4a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.4a.1:c.639C>T | |||||||
HGVSp | CE13361:p.Gly213= | |||||||
cDNA_position | 782 | |||||||
CDS_position | 639 | |||||||
Protein_position | 213 | |||||||
Exon_number | 7/11 | |||||||
Codon_change | ggC/ggT | |||||||
Amino_acid_change | G | |||||||
Method | WGS_Flibotte |