WormBase Tree Display for Expression_cluster: WBPaper00056034:pals-22(jy3)_upregulated
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| WBPaper00056034:pals-22(jy3)_upregulated | Description | Transcripts that showed significantly increased expression in pals-22(jy3) comparing to in N2 at L4 larva stage. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Differential expression analysis was performed in RStudio (v1.1.453) using R (v3.50) and Bioconductor (v3.7) packages. As outlined in the RNAseq123 vignette, data was imported, filtered and normalized using edgeR, and linear modeling and differential expression analysis was performed using limma. An FDR cutoff of <0.01 was used to define differentially expressed genes; no fold-change criteria was used. | ||
| Reference | WBPaper00056034 | ||
| Based_on_WB_Release | 235 | ||
| Gene (2754) | |||
| Attribute_of | RNASeq | ||
| Regulation | Regulated_by_gene | WBGene00016216 | |
| Associated_with | Life_stage | WBls:0000038 |
