WormBase Tree Display for Expression_cluster: WBPaper00059231:alh-6(lax105)_L4_downregulated
expand all nodes | collapse all nodes | view schema
| WBPaper00059231:alh-6(lax105)_L4_downregulated | Description | Transcripts that showed significantly decreased expression in alh-6(lax105) comparing to in N2 at L4 larva stage. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Differential expression analysis of two conditions was performed using DESeq R package (1.18.0). Resulting p-values were adjusted using Benjamini and Hochberg's approach. WormBase curator applied additional cut off of fold change > 2. | ||
| Reference | WBPaper00059231 | ||
| Based_on_WB_Release | |||
| Gene | WBGene00011446 | log2FoldChange: -1.0874, pval: 5.4347E-06, padj: 0.00017221 | |
| WBGene00008628 | log2FoldChange: -1.006, pval: 0.00089602, padj: 0.014176 | ||
| WBGene00010085 | log2FoldChange: -1.0723, pval: 5.1126E-19, padj: 1.3281E-16 | ||
| WBGene00021263 | log2FoldChange: -1.3889, pval: 0.0025586, padj: 0.033136 | ||
| WBGene00016699 | log2FoldChange: -2.9154, pval: 0.00076765, padj: 0.012527 | ||
| WBGene00016417 | log2FoldChange: -1.0021, pval: 0.00048207, padj: 0.0085268 | ||
| WBGene00007817 | log2FoldChange: -1.0532, pval: 0.00089193, padj: 0.014132 | ||
| WBGene00018470 | log2FoldChange: -1.0178, pval: 4.0748E-10, padj: 2.7502E-08 | ||
| WBGene00007506 | log2FoldChange: -1.7491, pval: 8.981E-12, padj: 8.1185E-10 | ||
| WBGene00012213 | log2FoldChange: -1.0758, pval: 4.5491E-09, padj: 2.6465E-07 | ||
| WBGene00018112 | log2FoldChange: -1.0649, pval: 7.4397E-06, padj: 0.00022893 | ||
| WBGene00009488 | log2FoldChange: -1.3738, pval: 3.4358E-29, padj: 4.2642E-26 | ||
| WBGene00018380 | log2FoldChange: -1.2253, pval: 1.3376E-08, padj: 7.1149E-07 | ||
| WBGene00000176 | log2FoldChange: -1.0187, pval: 5.8652E-07, padj: 0.000023609 | ||
| WBGene00008113 | log2FoldChange: -1.1709, pval: 0.00033716, padj: 0.0062559 | ||
| WBGene00008207 | log2FoldChange: -1.4048, pval: 0.00032639, padj: 0.0060967 | ||
| WBGene00016320 | log2FoldChange: -4.0424, pval: 6.114E-08, padj: 2.9373E-06 | ||
| WBGene00017105 | log2FoldChange: -1.5865, pval: 0.0032034, padj: 0.039559 | ||
| WBGene00017390 | log2FoldChange: -1.092, pval: 0.00045058, padj: 0.0080398 | ||
| WBGene00013633 | log2FoldChange: -1.0567, pval: 8.9907E-06, padj: 0.00027033 | ||
| WBGene00019540 | log2FoldChange: -1.0477, pval: 0.000026675, padj: 0.00070753 | ||
| WBGene00009957 | log2FoldChange: -1.006, pval: 9.7341E-24, padj: 5.1776E-21 | ||
| WBGene00021978 | log2FoldChange: -3.0794, pval: 0.000017595, padj: 0.00049258 | ||
| WBGene00010690 | log2FoldChange: -1.1218, pval: 0.0018185, padj: 0.025248 | ||
| WBGene00009090 | log2FoldChange: -1.1047, pval: 5.6184E-07, padj: 0.000022697 | ||
| WBGene00044665 | log2FoldChange: -1.5972, pval: 2.0844E-07, padj: 9.1307E-06 | ||
| WBGene00015706 | log2FoldChange: -2.4771, pval: 0.00063792, padj: 0.010764 | ||
| WBGene00017541 | log2FoldChange: -1.1016, pval: 4.0965E-18, padj: 9.0609E-16 | ||
| WBGene00013391 | log2FoldChange: -1.2017, pval: 1.4086E-20, padj: 4.3107E-18 | ||
| WBGene00008245 | log2FoldChange: -1.0937, pval: 5.6842E-06, padj: 0.00017936 | ||
| WBGene00045457 | log2FoldChange: -1.3063, pval: 0.00027586, padj: 0.0052975 | ||
| WBGene00045261 | log2FoldChange: -1.4126, pval: 0.00053062, padj: 0.0092107 | ||
| WBGene00045268 | log2FoldChange: -1.2737, pval: 0.000013512, padj: 0.0003894 | ||
| WBGene00011325 | log2FoldChange: -1.0675, pval: 0.00016297, padj: 0.0034315 | ||
| WBGene00007315 | log2FoldChange: -1.0419, pval: 2.3847E-06, padj: 0.000082809 | ||
| WBGene00003765 | log2FoldChange: -1.1191, pval: 1.2091E-09, padj: 7.5453E-08 | ||
| WBGene00004052 | log2FoldChange: -1.6434, pval: 9.1526E-07, padj: 0.000034952 | ||
| WBGene00022822 | log2FoldChange: -1.0943, pval: 1.0695E-15, padj: 1.7189E-13 | ||
| WBGene00044922 | log2FoldChange: -1.3142, pval: 8.5328E-10, padj: 5.4463E-08 | ||
| WBGene00013602 | log2FoldChange: -1.4891, pval: 0.000010999, padj: 0.00032503 | ||
| WBGene00021272 | log2FoldChange: -1.17, pval: 0.003469, padj: 0.042164 | ||
| WBGene00016788 | log2FoldChange: -1.4147, pval: 1.4341E-12, padj: 1.4764E-10 | ||
| WBGene00077764 | log2FoldChange: -1.2464, pval: 0.00024531, padj: 0.0047907 | ||
| WBGene00015903 | log2FoldChange: -1.1617, pval: 0.000023183, padj: 0.00062398 | ||
| WBGene00010223 | log2FoldChange: -1.0849, pval: 0.0016849, padj: 0.023718 | ||
| WBGene00009106 | log2FoldChange: -2.9795, pval: 5.3666E-52, padj: 1.1989E-47 | ||
| WBGene00007366 | log2FoldChange: -2.7852, pval: 3.5496E-17, padj: 6.7777E-15 | ||
| WBGene00011450 | log2FoldChange: -2.337, pval: 0.0037193, padj: 0.044479 | ||
| WBGene00003643 | log2FoldChange: -1.0601, pval: 9.1119E-08, padj: 4.2497E-06 | ||
| WBGene00023423 | log2FoldChange: -2.7183, pval: 1.2475E-07, padj: 5.6647E-06 | ||
| WBGene00045411 | log2FoldChange: -1.4606, pval: 0.0038445, padj: 0.045635 | ||
| WBGene00021977 | log2FoldChange: -1.3037, pval: 1.1896E-20, padj: 3.7432E-18 | ||
| WBGene00022820 | log2FoldChange: -1.0385, pval: 1.4902E-13, padj: 1.8093E-11 | ||
| WBGene00017361 | log2FoldChange: -1.0406, pval: 1.1087E-06, padj: 0.000041488 | ||
| WBGene00021979 | log2FoldChange: -1.9829, pval: 2.3284E-21, padj: 8.3897E-19 | ||
| WBGene00077593 | log2FoldChange: -1.964, pval: 1.5633E-13, padj: 1.8878E-11 | ||
| WBGene00010234 | log2FoldChange: -1.0794, pval: 0.0031188, padj: 0.038686 | ||
| WBGene00044535 | log2FoldChange: -1.1353, pval: 1.65E-08, padj: 8.5921E-07 | ||
| WBGene00016360 | log2FoldChange: -1.2453, pval: 2.0918E-10, padj: 0.000000015 | ||
| WBGene00022326 | log2FoldChange: -1.1754, pval: 1.4366E-07, padj: 6.4444E-06 | ||
| WBGene00017569 | log2FoldChange: -1.1493, pval: 8.3061E-10, padj: 5.3169E-08 | ||
| WBGene00013392 | log2FoldChange: -1.1786, pval: 5.9045E-13, padj: 6.4344E-11 | ||
| WBGene00012557 | log2FoldChange: -1.0242, pval: 3.9716E-17, padj: 7.5192E-15 | ||
| WBGene00003764 | log2FoldChange: -1.0277, pval: 3.2675E-12, padj: 3.1464E-10 | ||
| WBGene00015196 | log2FoldChange: -1.0965, pval: 7.8764E-13, padj: 8.4596E-11 | ||
| WBGene00008211 | log2FoldChange: -1.0487, pval: 9.5748E-08, padj: 4.4378E-06 | ||
| WBGene00007989 | log2FoldChange: -1.2584, pval: 0.0021236, padj: 0.02851 | ||
| WBGene00016785 | log2FoldChange: -2.8711, pval: 0.0034321, padj: 0.04183 | ||
| WBGene00021610 | log2FoldChange: -1.4729, pval: 0.003629, padj: 0.043681 | ||
| WBGene00000133 | log2FoldChange: -1.5621, pval: 4.7945E-12, padj: 4.5194E-10 | ||
| WBGene00008844 | log2FoldChange: -1.6465, pval: 0.002774, padj: 0.035392 | ||
| WBGene00021435 | log2FoldChange: -1.9999, pval: 1.1382E-07, padj: 0.000005232 | ||
| WBGene00013393 | log2FoldChange: -1.0877, pval: 4.9439E-17, padj: 9.2039E-15 | ||
| WBGene00021005 | log2FoldChange: -1.0942, pval: 2.6893E-06, padj: 0.000091723 | ||
| WBGene00011042 | log2FoldChange: -1.2094, pval: 0.00053729, padj: 0.0093047 | ||
| WBGene00016783 | log2FoldChange: -2.6582, pval: 6.1794E-16, padj: 1.0151E-13 | ||
| WBGene00012211 | log2FoldChange: -1.4814, pval: 3.0077E-06, padj: 0.00010074 | ||
| WBGene00007459 | log2FoldChange: -2.318, pval: 0.0011265, padj: 0.017179 | ||
| WBGene00015449 | log2FoldChange: -1.1536, pval: 0.00026414, padj: 0.0051046 | ||
| WBGene00010183 | log2FoldChange: -1.2713, pval: 7.8609E-07, padj: 0.000030863 | ||
| WBGene00001730 | log2FoldChange: -1.0931, pval: 7.2333E-24, padj: 4.0398E-21 | ||
| WBGene00008476 | log2FoldChange: -1.4469, pval: 2.8299E-14, padj: 3.7631E-12 | ||
| WBGene00022821 | log2FoldChange: -1.2699, pval: 3.9512E-10, padj: 2.6748E-08 | ||
| WBGene00018167 | log2FoldChange: -2.1701, pval: 5.7969E-06, padj: 0.0001824 | ||
| WBGene00015574 | log2FoldChange: -1.1657, pval: 7.1281E-07, padj: 0.000028184 | ||
| WBGene00010613 | log2FoldChange: -1.2887, pval: 2.8597E-10, padj: 1.9902E-08 | ||
| WBGene00020774 | log2FoldChange: -1.1614, pval: 0.0019747, padj: 0.026998 | ||
| WBGene00022814 | log2FoldChange: -2.9936, pval: 7.1085E-15, padj: 1.0245E-12 | ||
| WBGene00017471 | log2FoldChange: -1.1229, pval: 0.000010583, padj: 0.00031357 | ||
| WBGene00011462 | log2FoldChange: -1.0923, pval: 3.2884E-09, padj: 1.9434E-07 | ||
| WBGene00017467 | log2FoldChange: -1.0865, pval: 8.9432E-06, padj: 0.00026926 | ||
| WBGene00020394 | log2FoldChange: -1.1636, pval: 1.9945E-06, padj: 0.000071406 | ||
| WBGene00022292 | log2FoldChange: -1.1371, pval: 0.000020046, padj: 0.00054948 | ||
| WBGene00194651 | log2FoldChange: -1.0207, pval: 0.0012918, padj: 0.019098 | ||
| WBGene00195183 | log2FoldChange: -1.2725, pval: 0.00042754, padj: 0.0076655 | ||
| WBGene00007537 | log2FoldChange: -1.0394, pval: 0.000019721, padj: 0.0005419 | ||
| WBGene00000752 | log2FoldChange: -1.0052, pval: 1.9145E-23, padj: 9.5043E-21 | ||
| WBGene00018170 | log2FoldChange: -1.3888, pval: 1.2639E-13, padj: 1.56E-11 | ||
| WBGene00018162 | log2FoldChange: -1.8349, pval: 0.00024504, padj: 0.0047907 | ||
| WBGene00206388 | log2FoldChange: -1.4576, pval: 0.00022429, padj: 0.0044564 | ||
| WBGene00194985 | log2FoldChange: -1.5402, pval: 0.003253, padj: 0.040062 | ||
| WBGene00022083 | log2FoldChange: -1.1096, pval: 0.0031541, padj: 0.039038 | ||
| WBGene00013837 | log2FoldChange: -2.3092, pval: 0.0029091, padj: 0.036717 | ||
| WBGene00235332 | log2FoldChange: -2.2588, pval: 0.000018559, padj: 0.00051441 | ||
| WBGene00219590 | log2FoldChange: -1.1086, pval: 0.0012668, padj: 0.01878 | ||
| WBGene00007715 | log2FoldChange: -Inf, pval: 1.5717E-12, padj: 1.6032E-10 | ||
| WBGene00003999 | log2FoldChange: -1.2972, pval: 5.0514E-10, padj: 3.3586E-08 | ||
| WBGene00001119 | log2FoldChange: -1.5007, pval: 1.0907E-12, padj: 1.1439E-10 | ||
| Attribute_of | RNASeq | ||
| Regulation | Regulated_by_gene | WBGene00000112 | |
| Associated_with | Life_stage | WBls:0000038 |
